| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210293
Identifier: 28210293
GI number: 28210293
Start: 573822
End: 574796
Strand: Direct
Name: 28210293
Synonym: CTC00555
Alternate gene names: NA
Gene position: 573822-574796 (Clockwise)
Preceding gene: 28210292
Following gene: 28210295
Centisome position: 20.5
GC content: 27.9
Gene sequence:
>975_bases ATGGGAAGAGTGGATATGGTGGATAAAAATAGTTTTATTAAAAATTCACTAGAAAATGAATTAAAAGATATTTATGTAAC TGAAGACTTAAAATTAAAAACTTTAAGCAGGATTAAAAAAGAAGATAATGTAGTTAAACCCTTTAAAAGAAAAAATAGGT TTTTATATAAAAGCATGAAAGGCTTAGCATTGGTGTCTTCTATTTTAATAATGTTTTTCACTTTTTCCTTTTTAAAATAC AATAGATTTATGAATGATAATTCACCAACAATAGATAATGATAATAATGGAAAGAATGTTGTATTAGATAATAAGGAAAA AGAAGAAAAGCTAGATAATCCAAAAGAGAAGATTGATGAAAAAAAAGAAGTTAAAGATACAAAGAATGAAAATATAAAGG AAAAAGACCCCAATGAGGGACAACCTAAGAAACCTAAAGATAATAAGATTGTAAATGGGGGAGATAATACCCCTACAAAT AAAGAAAAAACTCAGCCAAATAAGCATATAAAAAATCCTAAGAAGGAAAATCCTAAACCTAGCCAAGGAAAGGAAAAACC TAAATTAAGTGAAGAACAAATGTTAGCTAAAGCTGAAAACCTCTGGGGAGGTAAAATAAATTTACCTTCGTATATTCCTA AAGGATATGATGTAACTAATATAGGTATGGATACAGCTTATGGTTCAAAGGTCTTAAAAATAACTTATAAAAATCCTAAC AGTGGTAACTTTCTAGAATTAAAAGTTCTAGAAGGAGATAAAACAGCATTTGAAGATGGAAATGGATCAAAAAATCCGAA GGAAAATGAAAAAAATGAGGACGATAATAGGCAAGATAATCCAAAGGAAAATGTTGATAAGCCTACTGAAACTGTGAAGA GTGTTAATAGTAATAAAAATGGTGTAGAATATAATATAGAAGGTAATATTCCAGCTAAAACACTAGAGAAAATTGCAGAA TCCATAGAAGAATAA
Upstream 100 bases:
>100_bases TTTTCAACGGTAGAAATAGGAGATATACTAAAAATAGCAGAAGGTACTGTAAGAAGTAGACTTTATAGAGGTAGACAAAT CTTAAAAAATATTTTGGAAG
Downstream 100 bases:
>100_bases AGTAAAAAGACTTAAACAAGTTTTAATGTTTAAGTCTTTTTACTTTATTCTAATTTTCTATAAAAAGTTGCTATACTTAT ACCAAGTTTTTTAGCAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGRVDMVDKNSFIKNSLENELKDIYVTEDLKLKTLSRIKKEDNVVKPFKRKNRFLYKSMKGLALVSSILIMFFTFSFLKY NRFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDEKKEVKDTKNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTN KEKTQPNKHIKNPKKENPKPSQGKEKPKLSEEQMLAKAENLWGGKINLPSYIPKGYDVTNIGMDTAYGSKVLKITYKNPN SGNFLELKVLEGDKTAFEDGNGSKNPKENEKNEDDNRQDNPKENVDKPTETVKSVNSNKNGVEYNIEGNIPAKTLEKIAE SIEE
Sequences:
>Translated_324_residues MGRVDMVDKNSFIKNSLENELKDIYVTEDLKLKTLSRIKKEDNVVKPFKRKNRFLYKSMKGLALVSSILIMFFTFSFLKY NRFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDEKKEVKDTKNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTN KEKTQPNKHIKNPKKENPKPSQGKEKPKLSEEQMLAKAENLWGGKINLPSYIPKGYDVTNIGMDTAYGSKVLKITYKNPN SGNFLELKVLEGDKTAFEDGNGSKNPKENEKNEDDNRQDNPKENVDKPTETVKSVNSNKNGVEYNIEGNIPAKTLEKIAE SIEE >Mature_323_residues GRVDMVDKNSFIKNSLENELKDIYVTEDLKLKTLSRIKKEDNVVKPFKRKNRFLYKSMKGLALVSSILIMFFTFSFLKYN RFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDEKKEVKDTKNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTNK EKTQPNKHIKNPKKENPKPSQGKEKPKLSEEQMLAKAENLWGGKINLPSYIPKGYDVTNIGMDTAYGSKVLKITYKNPNS GNFLELKVLEGDKTAFEDGNGSKNPKENEKNEDDNRQDNPKENVDKPTETVKSVNSNKNGVEYNIEGNIPAKTLEKIAES IEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36958; Mature: 36827
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVDMVDKNSFIKNSLENELKDIYVTEDLKLKTLSRIKKEDNVVKPFKRKNRFLYKSMK CCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLALVSSILIMFFTFSFLKYNRFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHH KKEVKDTKNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTNKEKTQPNKHIKNPKKENPKP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCC SQGKEKPKLSEEQMLAKAENLWGGKINLPSYIPKGYDVTNIGMDTAYGSKVLKITYKNPN CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC SGNFLELKVLEGDKTAFEDGNGSKNPKENEKNEDDNRQDNPKENVDKPTETVKSVNSNKN CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCC GVEYNIEGNIPAKTLEKIAESIEE CEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure GRVDMVDKNSFIKNSLENELKDIYVTEDLKLKTLSRIKKEDNVVKPFKRKNRFLYKSMK CCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLALVSSILIMFFTFSFLKYNRFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHH KKEVKDTKNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTNKEKTQPNKHIKNPKKENPKP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCC SQGKEKPKLSEEQMLAKAENLWGGKINLPSYIPKGYDVTNIGMDTAYGSKVLKITYKNPN CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC SGNFLELKVLEGDKTAFEDGNGSKNPKENEKNEDDNRQDNPKENVDKPTETVKSVNSNKN CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCC GVEYNIEGNIPAKTLEKIAESIEE CEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA