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The map label for this gene is 28210273

Identifier: 28210273

GI number: 28210273

Start: 546658

End: 547968

Strand: Direct

Name: 28210273

Synonym: CTC00533

Alternate gene names: NA

Gene position: 546658-547968 (Clockwise)

Preceding gene: 28210272

Following gene: 28210274

Centisome position: 19.53

GC content: 26.32

Gene sequence:

>1311_bases
ATGAATATGGAAATATTATCTCTTGGCGAAAAGATAAAAAGAAGAAGAAAAGAACTTAATATGACATTAAAGGATTTAGC
AGGAGATAGAATTACACCAGGGCAAATAAGCCTTGTGGAGTCTGGAAAATCAAATCCGAGTATGGACTTATTAGAATATC
TATCTGAAGCTTTAGATGTATCTATAGAATATTTAATGGAAACAGAAGAAACACAAGCAGAAAAAGTATGCTACTATTTT
GAAAATATAGCAGAAGCTCACATTTTAAATAATGATTTAAGTTTAGGTGAGGAATATACAGAAAAAGCTTTATATTATGC
AGAGAAGTATAATCTAGAGTACAAAAAAGCTAAAAATTTTTATTTAAGAGGCTTAATATATATGAGAGCAAAGAATCCTA
CCCTTGCTCAGCAAGCTCTTTTAGCAGCTAATGTTGTATTTATAAAAAATAATAAATATGAGGAAATTATAAAATCCTTT
GTTAATTTAGGAAAGATAACTTTAGAGTTAAAGGCATATCACTCATCATATAGTTATTTTCAGCAGGCAGAAAAAGTTTA
CAATGATAATAATATAGGAGACGATTTTTTATTAGGAGAAATTTATTACTATATGTCTTATACTAATTTAAAACTAGAGA
ATTTAGATAAATCTATAAATTACTTATTTCTAGCAAAAGAAAAATTCAAACAATTAGATAATGAAAAAGAGTATGGTAGG
ATTCTAATTATGATGGCAGAACAATATAGTAAAAGTGGTAATATAACAGAATCAGTGAAGTATTCTCAAAAAGCATTAGG
TATATTTAAGAAGATGGATGATAAATTTTATATGGCTCAAATAGAGAATAACCTAGGAAAATTATTTTCTGAATTTGAAA
ATATCGAGGAGTCTTTCATTCATCTTAATAAAGCAAAAGAGCTAAGACTTATTATGAAAGATGATAAACTAATAGAAACG
CTAATAAATATATGTGAAAATTATATAAAAATAAGAGACATAGATGGATCCAATAGAGCATTGGAAAATATATTTAAAAA
TATAAAAGATGATGATAAAGAGTCTTTGATAAAATATTATATATTAAAATACAAAATACATATGTTAGAAGGTGAGCTAA
ATAAGGCGGAAAATACTTTAGTTCAGACATTGAGCTTTGTTAAGAATGTTGATTATTTAAAAGATGCAGCTGAGATATCT
ATAATGTTAGGTAAATTTTATATAGATATAGGTAAAGAAAAGGATGCAGCAACGTACTTAAATGAGGGAGTAACGTTATT
TAAAAAAATAGGTGTTCTTAAAGAAGGATAA

Upstream 100 bases:

>100_bases
TATGCAAAATTATAAAGAATTTAAACAAATAAAGTAATACTTTAAGTAATTAATATATTAAAATAGCGTATTAAAATAAC
TTATTGATAGTAAAGGAAGA

Downstream 100 bases:

>100_bases
TGGATGGTGGGTAATATGGAGATATTTTCTGTTGGTGAAAAAATAAAGAGAGCAAGGATTTATAAAGGATATACATTAAA
AGATATATGTGGTGATAAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Tetratricopeptide Repeat Protein; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNMEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLSEALDVSIEYLMETEETQAEKVCYYF
ENIAEAHILNNDLSLGEEYTEKALYYAEKYNLEYKKAKNFYLRGLIYMRAKNPTLAQQALLAANVVFIKNNKYEEIIKSF
VNLGKITLELKAYHSSYSYFQQAEKVYNDNNIGDDFLLGEIYYYMSYTNLKLENLDKSINYLFLAKEKFKQLDNEKEYGR
ILIMMAEQYSKSGNITESVKYSQKALGIFKKMDDKFYMAQIENNLGKLFSEFENIEESFIHLNKAKELRLIMKDDKLIET
LINICENYIKIRDIDGSNRALENIFKNIKDDDKESLIKYYILKYKIHMLEGELNKAENTLVQTLSFVKNVDYLKDAAEIS
IMLGKFYIDIGKEKDAATYLNEGVTLFKKIGVLKEG

Sequences:

>Translated_436_residues
MNMEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLSEALDVSIEYLMETEETQAEKVCYYF
ENIAEAHILNNDLSLGEEYTEKALYYAEKYNLEYKKAKNFYLRGLIYMRAKNPTLAQQALLAANVVFIKNNKYEEIIKSF
VNLGKITLELKAYHSSYSYFQQAEKVYNDNNIGDDFLLGEIYYYMSYTNLKLENLDKSINYLFLAKEKFKQLDNEKEYGR
ILIMMAEQYSKSGNITESVKYSQKALGIFKKMDDKFYMAQIENNLGKLFSEFENIEESFIHLNKAKELRLIMKDDKLIET
LINICENYIKIRDIDGSNRALENIFKNIKDDDKESLIKYYILKYKIHMLEGELNKAENTLVQTLSFVKNVDYLKDAAEIS
IMLGKFYIDIGKEKDAATYLNEGVTLFKKIGVLKEG
>Mature_436_residues
MNMEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLSEALDVSIEYLMETEETQAEKVCYYF
ENIAEAHILNNDLSLGEEYTEKALYYAEKYNLEYKKAKNFYLRGLIYMRAKNPTLAQQALLAANVVFIKNNKYEEIIKSF
VNLGKITLELKAYHSSYSYFQQAEKVYNDNNIGDDFLLGEIYYYMSYTNLKLENLDKSINYLFLAKEKFKQLDNEKEYGR
ILIMMAEQYSKSGNITESVKYSQKALGIFKKMDDKFYMAQIENNLGKLFSEFENIEESFIHLNKAKELRLIMKDDKLIET
LINICENYIKIRDIDGSNRALENIFKNIKDDDKESLIKYYILKYKIHMLEGELNKAENTLVQTLSFVKNVDYLKDAAEIS
IMLGKFYIDIGKEKDAATYLNEGVTLFKKIGVLKEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50793; Mature: 50793

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLSEALDV
CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
SIEYLMETEETQAEKVCYYFENIAEAHILNNDLSLGEEYTEKALYYAEKYNLEYKKAKNF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHCCC
YLRGLIYMRAKNPTLAQQALLAANVVFIKNNKYEEIIKSFVNLGKITLELKAYHSSYSYF
EEEEEEEEEECCCHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCEEEEEEEHHHHHHHHH
QQAEKVYNDNNIGDDFLLGEIYYYMSYTNLKLENLDKSINYLFLAKEKFKQLDNEKEYGR
HHHHHHHCCCCCCCHHHHHHHHHHHEECCEEHHHHCCCCCEEEEEHHHHHHCCCCCCCCE
ILIMMAEQYSKSGNITESVKYSQKALGIFKKMDDKFYMAQIENNLGKLFSEFENIEESFI
EEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLNKAKELRLIMKDDKLIETLINICENYIKIRDIDGSNRALENIFKNIKDDDKESLIKYY
HHCCHHHHEEEECCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
ILKYKIHMLEGELNKAENTLVQTLSFVKNVDYLKDAAEISIMLGKFYIDIGKEKDAATYL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEEEECCCCHHHHHH
NEGVTLFKKIGVLKEG
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNMEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPSMDLLEYLSEALDV
CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
SIEYLMETEETQAEKVCYYFENIAEAHILNNDLSLGEEYTEKALYYAEKYNLEYKKAKNF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHCCC
YLRGLIYMRAKNPTLAQQALLAANVVFIKNNKYEEIIKSFVNLGKITLELKAYHSSYSYF
EEEEEEEEEECCCHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCEEEEEEEHHHHHHHHH
QQAEKVYNDNNIGDDFLLGEIYYYMSYTNLKLENLDKSINYLFLAKEKFKQLDNEKEYGR
HHHHHHHCCCCCCCHHHHHHHHHHHEECCEEHHHHCCCCCEEEEEHHHHHHCCCCCCCCE
ILIMMAEQYSKSGNITESVKYSQKALGIFKKMDDKFYMAQIENNLGKLFSEFENIEESFI
EEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLNKAKELRLIMKDDKLIETLINICENYIKIRDIDGSNRALENIFKNIKDDDKESLIKYY
HHCCHHHHEEEECCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
ILKYKIHMLEGELNKAENTLVQTLSFVKNVDYLKDAAEISIMLGKFYIDIGKEKDAATYL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEEEECCCCHHHHHH
NEGVTLFKKIGVLKEG
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA