| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210261
Identifier: 28210261
GI number: 28210261
Start: 529057
End: 530802
Strand: Direct
Name: 28210261
Synonym: CTC00519
Alternate gene names: NA
Gene position: 529057-530802 (Clockwise)
Preceding gene: 28210260
Following gene: 28210262
Centisome position: 18.9
GC content: 30.47
Gene sequence:
>1746_bases TTGACAAAACACACGGGAAACGCTAAAATTAAATTGTGTATTAAGAATAGTCAGAAAAATGTAAAAACGAAAGGAAGTGC TGTAATGTTTAATCAAAGAAGAGTTAATAAAATTATAACAACTATGGCCTTAACATTATCATTAATTTTATCATCATTTT CCCAGGTGTTTGCAGCTCCATATTTACCAAATGATTATAATAAGCAACCTGAAAATATAATTAAAAAACATTTTCCAAAA CCAGCAGGACCTATATTAACTCCAGCTTTTAAAGAAGGTAAGAAAGATTTTACATCTCATGATGAAATGATGGAATTTAT CTATGATCTTCAAAAAACTAGTAATCATATGAAGGTTTCAATTATTGGACAAACCCAAGAAGGCAAACCAATTCCTTTAT TAATATTTAGTAATCCATCTTATTCTAATGCAGCAGATATATTAAAACTTGAAAGACCAGTTGTATGGCTTCAAGGGCAA ATACATGGAAATGAACCTGCAGGAGGAGAGGGTGCCCTAGGGGTAGCTAAAAACCTTGCAGGTAAATTAGGAGATGAAGT ATTAGGAAAGGTTTCAGTGGTGATACTTCCAAGATTCAATGGGGACGGTTCTTTTTATTTTCAAAGACAAATGGCATCAA AATTAGATAGTAACAGAGACCACTTAAAATTTGATATACAAGAAACTATTTTAGTTCATGAAGCCTTTAATGAATTTAAA CCGGAAGTTGTAATAGATGCTCATGAATATTCAGTTTTTGGTAAGTTTAAAAATGTAGGAAGTAAAGGTGGTTTAGTCTA CCATGACATTTTAATATCTTCTGCTAAAAATTTAAATATACCAAAGGATGTAAGAAAGGTTTCTGATAATTTATTTGTAA ATAATGCTCAAAAAGATTTAGCTTCTAGAAATTTTTCAAACTATGATTATTATACTTTTACTGAAAAAGGGGGCAAGCCA ACTATATTTGAAGCGGGGACAGATCCTAAAATAGGAAGAAATGCCTATGGGCTTCAACCTTCATTTTCATTTTTGGTTGA ATCAAGGGGCATAGGTATTGGTAAAGAAAATTTTGAAAGAAGAGTACTAAGTCATATAGTGTCAGCACAAAACATAATAA GAAGCACTGCTAATAATGCAGATTTAGTAAAGAAAACTATAGATAATGCACGAAAAGAAATAACTAAATTAGGTAAAACT GTAGATCCTAATGACAAATTAGTATTAAGAGATCTACATAAGAAAGTTGCCAATGATAAATTAGATATTATAGATATTGG TACGGGAGAAAAAGTAAAACTAGATGTAGAAGTTTTTAGCAGTAAAGAAGCAATACCAACTTTAGAAAGAGTAAGACCAA CAGCCTATATACTTCCTCCAGCCTATCATGAAGTAGCTAAGAGATTATCTTATTCAGGGGTGGTTGTAAGAAAGTTAAAT AAAGATATGGAGCTTCCAGTAGAAGCATATAAAGTTAAAGATAAAAAGATTGACACAAATTATTACGAAGGACATTTAAG AAATGATGTTACTGTAGATGTAAATAAAAAGAATGCAGCCTTTCCTAAAGGAAGCTATGTATTTACAATGGATCAACCAA ATGCCAATTTAATAGCTATGTGTTTAGAACCAGATGCTGAAGATAGTTTTGTAAAGTTTAATATAATTCCAGCGGAAATA AATAATGAATTACCAGTTTATAGATATGTAGAGAATAAAAGTATAGATGCTAAGATAATTAAATAA
Upstream 100 bases:
>100_bases TATAAAAGTTAGAGAGTTTAAAGAAAAGAATATATCAGGATATGGGAGAAAGAAAGCATTATTTTAATTAAAAGATAGAT AGTGAAATTATAACCATATA
Downstream 100 bases:
>100_bases AAATATTAAATGTAGTGAAGAATTTAAACTTTTATTTTAGATTCTATACATTAGTAATATACGAACCCAGGACTTTTATA AGTTTTGGGTTTTTTATTGT
Product: zink-carboxypeptidase
Products: NA
Alternate protein names: Carboxypeptidase; Zinc Carboxypeptidase Family Protein; Peptidase Family M; Zinc-Carboxypeptidase; M14 Family Carboxypeptidase; Zink-Carboxypeptidase; Zinc Carboxypeptidase Family; M14 Family Peptidase
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MTKHTGNAKIKLCIKNSQKNVKTKGSAVMFNQRRVNKIITTMALTLSLILSSFSQVFAAPYLPNDYNKQPENIIKKHFPK PAGPILTPAFKEGKKDFTSHDEMMEFIYDLQKTSNHMKVSIIGQTQEGKPIPLLIFSNPSYSNAADILKLERPVVWLQGQ IHGNEPAGGEGALGVAKNLAGKLGDEVLGKVSVVILPRFNGDGSFYFQRQMASKLDSNRDHLKFDIQETILVHEAFNEFK PEVVIDAHEYSVFGKFKNVGSKGGLVYHDILISSAKNLNIPKDVRKVSDNLFVNNAQKDLASRNFSNYDYYTFTEKGGKP TIFEAGTDPKIGRNAYGLQPSFSFLVESRGIGIGKENFERRVLSHIVSAQNIIRSTANNADLVKKTIDNARKEITKLGKT VDPNDKLVLRDLHKKVANDKLDIIDIGTGEKVKLDVEVFSSKEAIPTLERVRPTAYILPPAYHEVAKRLSYSGVVVRKLN KDMELPVEAYKVKDKKIDTNYYEGHLRNDVTVDVNKKNAAFPKGSYVFTMDQPNANLIAMCLEPDAEDSFVKFNIIPAEI NNELPVYRYVENKSIDAKIIK
Sequences:
>Translated_581_residues MTKHTGNAKIKLCIKNSQKNVKTKGSAVMFNQRRVNKIITTMALTLSLILSSFSQVFAAPYLPNDYNKQPENIIKKHFPK PAGPILTPAFKEGKKDFTSHDEMMEFIYDLQKTSNHMKVSIIGQTQEGKPIPLLIFSNPSYSNAADILKLERPVVWLQGQ IHGNEPAGGEGALGVAKNLAGKLGDEVLGKVSVVILPRFNGDGSFYFQRQMASKLDSNRDHLKFDIQETILVHEAFNEFK PEVVIDAHEYSVFGKFKNVGSKGGLVYHDILISSAKNLNIPKDVRKVSDNLFVNNAQKDLASRNFSNYDYYTFTEKGGKP TIFEAGTDPKIGRNAYGLQPSFSFLVESRGIGIGKENFERRVLSHIVSAQNIIRSTANNADLVKKTIDNARKEITKLGKT VDPNDKLVLRDLHKKVANDKLDIIDIGTGEKVKLDVEVFSSKEAIPTLERVRPTAYILPPAYHEVAKRLSYSGVVVRKLN KDMELPVEAYKVKDKKIDTNYYEGHLRNDVTVDVNKKNAAFPKGSYVFTMDQPNANLIAMCLEPDAEDSFVKFNIIPAEI NNELPVYRYVENKSIDAKIIK >Mature_580_residues TKHTGNAKIKLCIKNSQKNVKTKGSAVMFNQRRVNKIITTMALTLSLILSSFSQVFAAPYLPNDYNKQPENIIKKHFPKP AGPILTPAFKEGKKDFTSHDEMMEFIYDLQKTSNHMKVSIIGQTQEGKPIPLLIFSNPSYSNAADILKLERPVVWLQGQI HGNEPAGGEGALGVAKNLAGKLGDEVLGKVSVVILPRFNGDGSFYFQRQMASKLDSNRDHLKFDIQETILVHEAFNEFKP EVVIDAHEYSVFGKFKNVGSKGGLVYHDILISSAKNLNIPKDVRKVSDNLFVNNAQKDLASRNFSNYDYYTFTEKGGKPT IFEAGTDPKIGRNAYGLQPSFSFLVESRGIGIGKENFERRVLSHIVSAQNIIRSTANNADLVKKTIDNARKEITKLGKTV DPNDKLVLRDLHKKVANDKLDIIDIGTGEKVKLDVEVFSSKEAIPTLERVRPTAYILPPAYHEVAKRLSYSGVVVRKLNK DMELPVEAYKVKDKKIDTNYYEGHLRNDVTVDVNKKNAAFPKGSYVFTMDQPNANLIAMCLEPDAEDSFVKFNIIPAEIN NELPVYRYVENKSIDAKIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65071; Mature: 64940
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHTGNAKIKLCIKNSQKNVKTKGSAVMFNQRRVNKIITTMALTLSLILSSFSQVFAAP CCCCCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YLPNDYNKQPENIIKKHFPKPAGPILTPAFKEGKKDFTSHDEMMEFIYDLQKTSNHMKVS CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHHHCCCCEEEE IIGQTQEGKPIPLLIFSNPSYSNAADILKLERPVVWLQGQIHGNEPAGGEGALGVAKNLA EEEECCCCCCEEEEEECCCCCCCHHHHHEECCCEEEEEEEEECCCCCCCCCCHHHHHHHH GKLGDEVLGKVSVVILPRFNGDGSFYFQRQMASKLDSNRDHLKFDIQETILVHEAFNEFK HHHHHHHHCCEEEEEEEEECCCCCEEEHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCC PEVVIDAHEYSVFGKFKNVGSKGGLVYHDILISSAKNLNIPKDVRKVSDNLFVNNAQKDL CCEEEEEHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHHCCCEEECHHHHH ASRNFSNYDYYTFTEKGGKPTIFEAGTDPKIGRNAYGLQPSFSFLVESRGIGIGKENFER HHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHH RVLSHIVSAQNIIRSTANNADLVKKTIDNARKEITKLGKTVDPNDKLVLRDLHKKVANDK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC LDIIDIGTGEKVKLDVEVFSSKEAIPTLERVRPTAYILPPAYHEVAKRLSYSGVVVRKLN EEEEECCCCCEEEEEEEEECCCCCCCHHHHCCCCEEECCCHHHHHHHHHCCCCEEEEECC KDMELPVEAYKVKDKKIDTNYYEGHLRNDVTVDVNKKNAAFPKGSYVFTMDQPNANLIAM CCCCCCHHHEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEE CLEPDAEDSFVKFNIIPAEINNELPVYRYVENKSIDAKIIK EECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEC >Mature Secondary Structure TKHTGNAKIKLCIKNSQKNVKTKGSAVMFNQRRVNKIITTMALTLSLILSSFSQVFAAP CCCCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YLPNDYNKQPENIIKKHFPKPAGPILTPAFKEGKKDFTSHDEMMEFIYDLQKTSNHMKVS CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHHHCCCCEEEE IIGQTQEGKPIPLLIFSNPSYSNAADILKLERPVVWLQGQIHGNEPAGGEGALGVAKNLA EEEECCCCCCEEEEEECCCCCCCHHHHHEECCCEEEEEEEEECCCCCCCCCCHHHHHHHH GKLGDEVLGKVSVVILPRFNGDGSFYFQRQMASKLDSNRDHLKFDIQETILVHEAFNEFK HHHHHHHHCCEEEEEEEEECCCCCEEEHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCC PEVVIDAHEYSVFGKFKNVGSKGGLVYHDILISSAKNLNIPKDVRKVSDNLFVNNAQKDL CCEEEEEHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCHHHHHHHHCCCEEECHHHHH ASRNFSNYDYYTFTEKGGKPTIFEAGTDPKIGRNAYGLQPSFSFLVESRGIGIGKENFER HHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHH RVLSHIVSAQNIIRSTANNADLVKKTIDNARKEITKLGKTVDPNDKLVLRDLHKKVANDK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC LDIIDIGTGEKVKLDVEVFSSKEAIPTLERVRPTAYILPPAYHEVAKRLSYSGVVVRKLN EEEEECCCCCEEEEEEEEECCCCCCCHHHHCCCCEEECCCHHHHHHHHHCCCCEEEEECC KDMELPVEAYKVKDKKIDTNYYEGHLRNDVTVDVNKKNAAFPKGSYVFTMDQPNANLIAM CCCCCCHHHEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEE CLEPDAEDSFVKFNIIPAEINNELPVYRYVENKSIDAKIIK EECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA