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The map label for this gene is hxlR [H]

Identifier: 28210228

GI number: 28210228

Start: 485612

End: 486139

Strand: Direct

Name: hxlR [H]

Synonym: CTC00480

Alternate gene names: 28210228

Gene position: 485612-486139 (Clockwise)

Preceding gene: 28210223

Following gene: 28210229

Centisome position: 17.35

GC content: 29.36

Gene sequence:

>528_bases
ATGATTGTATTTATATTAACAAGTACTTACTTTTTTGTTAGCTGGTTACTTCAATGTAACCATTTTAAGCTTTATCATAA
TTTATGGAGGGGATTACTTGTGAAAAAAGTGACAAAGGATGTTTATGTTTGTGGTGTTGAACTTACTACAGATATATTAG
GTGGTAAGTGGAGAATAATGATACTTTGGTACCTAAGAAAGAAGAGTCTTCGTTTTGGACAATTAAAGAGATCCCTAAAG
GGTATAAGTGAAAAGGTATTAAGTCAGGAATTAAAGCAGTTAACCGAATTGGGGCTTATCGATAAAAAGGTGTATTATCA
AAAACCACTTAAAGTAGAGTATAGTTTAACGAATTATGGTAGGACATTTCTGCCTACACTTTACTCTATATTTGAGTGGG
GAGCACATTATGCTGAGATATTTAATATACCATTAATTATAGATGAAGCTACTATAGATGAAGTTTTAAATGAAAAAGAA
AGATTCTTATTAAAATATAAAAATAATAAATTGGAATCTGTGAATTAA

Upstream 100 bases:

>100_bases
ATAATGTTTTTCATTAGAACCCCTCCTATATAATAAAGTTTTTAAAGAATATTCTGTATTTTGATTATATTTTGTTTTTG
TATTACTATATTACTATAGC

Downstream 100 bases:

>100_bases
TTAATATTTTAATGGAAAAGGAATTAGAAAAACATAAAATTATCTGACAAAGTAAAAGTAAATGTGGATAAAATGTATAA
AGAAGAGACAGCCAAGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTTDILGGKWRIMILWYLRKKSLRFGQLKRSLK
GISEKVLSQELKQLTELGLIDKKVYYQKPLKVEYSLTNYGRTFLPTLYSIFEWGAHYAEIFNIPLIIDEATIDEVLNEKE
RFLLKYKNNKLESVN

Sequences:

>Translated_175_residues
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTTDILGGKWRIMILWYLRKKSLRFGQLKRSLK
GISEKVLSQELKQLTELGLIDKKVYYQKPLKVEYSLTNYGRTFLPTLYSIFEWGAHYAEIFNIPLIIDEATIDEVLNEKE
RFLLKYKNNKLESVN
>Mature_175_residues
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTTDILGGKWRIMILWYLRKKSLRFGQLKRSLK
GISEKVLSQELKQLTELGLIDKKVYYQKPLKVEYSLTNYGRTFLPTLYSIFEWGAHYAEIFNIPLIIDEATIDEVLNEKE
RFLLKYKNNKLESVN

Specific function: Positive regulator of hxlAB expression [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 20798; Mature: 20798

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTTDILGGKWRIM
CEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCCEEEE
ILWYLRKKSLRFGQLKRSLKGISEKVLSQELKQLTELGLIDKKVYYQKPLKVEYSLTNYG
EEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHCC
RTFLPTLYSIFEWGAHYAEIFNIPLIIDEATIDEVLNEKERFLLKYKNNKLESVN
CHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTTDILGGKWRIM
CEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCCEEEE
ILWYLRKKSLRFGQLKRSLKGISEKVLSQELKQLTELGLIDKKVYYQKPLKVEYSLTNYG
EEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHCC
RTFLPTLYSIFEWGAHYAEIFNIPLIIDEATIDEVLNEKERFLLKYKNNKLESVN
CHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377; 1715856 [H]