| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210166
Identifier: 28210166
GI number: 28210166
Start: 408650
End: 409882
Strand: Direct
Name: 28210166
Synonym: CTC00413
Alternate gene names: NA
Gene position: 408650-409882 (Clockwise)
Preceding gene: 28210165
Following gene: 28210167
Centisome position: 14.6
GC content: 22.06
Gene sequence:
>1233_bases GTGATTACAATACAATCCAAGGAGGTAGGAATTATGAATATAAAAAGTTACAAAAAGTTTATTATTATTTCTATGGGTAT TTTTGTAATTTTAATTTTATCAGCATGTAATAATTCTAAAAATGATATAATAATAAGTGATAACATTAAAGAAGAATTTA AAAAACAAGATAAAGATAATTTAAGCATATCAAAAATTAACAATTCAAATTTAGGATATGTAAACATTGGACCTTATTGT TGGAAGGATGATGAAAATTTTGTTGGAATGCACTCCCATGACAATTATGAAATAAATGATATATATAATGTAAATGTAAA AACATCTAAAGCAACTAAAGTGGATACACTTGAAGATGTAACAATATTTACTTATATGAACTATGAAGTCAAAAATAATA AACTTATATATTCAAAAAATAATAAATTATGGATTTATGATTTAATAAATAATAAATCTAAAGAAATATGGGACTTAACA GAAGTTCAAGATGAAATGAGTAAATATGGTGCTAATATAAGTTTTGTAAAGGGTAGTGATAAATATATAAGTATTGTAAC TATAAAAAAATATGGTAAAGAAGAATTTAAAAATATAAGAATGTTAGATATTAATACAGGTAAAGTTGTTAAAAGTAATG ATATGAAAATACCTCTATTTAAGTCATTTATGTATAGCAAAGAAAAAGATGCCTTTTATGTAAGCAAAGGTGAAAATATA TATGAATATATATATGAATATAATCTTAGTAATCCTAATGAAATAAAAAAGATAGAGAATACCCAAAAAGACTACATGTA TGATTGTATGGAAATATCTGATGATGGAAAGTATATTTATTCTATAGTTTATGATAAAAAGACAAATAAAAGGCATAGAA AAAGTAAAATTGTAAAATATGATATTTTGAAAAATAAATTTACTACAATTTCAGATGAAAATAGTGGATATCTTTTTTTA GAATTTAATCCTAAAACTAATATCATAATTTATACTTATGTAGATAATGAGCATAAAAAGGCATATACGTGTATTGGAAG AGTTAAAGGGAATAAGATAGAAAATACTAAAAGAGTACCTCTTGAAGATATAGGAGAAGTAAAGTGGAATACAGCATTAA CAATGATGAATGAAAAAAGTACTAGATTTACTTATATGGTTCCATATCAAAAAATTAATGATAAGAATGATACTTTACGT TTATTATTAAATGCTTATGAAATTAAAAAATAA
Upstream 100 bases:
>100_bases ATAGAAAATGGAGAACGAATTAAAGTAACAATAAAGATACCTTGTCTTGGAAACAATTTGGAAATAACTTAACTAATAAC AGAAACAATTAAATGATATA
Downstream 100 bases:
>100_bases AGGAGATATTAACATGGGAATTTTTGATGGATTAATGGGAAATGCCTCAGAAGTGAACTCAGAACAAGTAAAAAAAGAAT ACGCACATATTTTAGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR LLLNAYEIKK
Sequences:
>Translated_410_residues MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR LLLNAYEIKK >Mature_410_residues MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR LLLNAYEIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48278; Mature: 48278
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDN CEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCC LSISKINNSNLGYVNIGPYCWKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDV CEEEEECCCCCEEEEECCEEECCCCCEEEECCCCCEEECEEEEEEEECCCCCCCCCCCCE TIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLTEVQDEMSKYGANISFVKGSD EEEEEEEEEEECCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC KYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI CEEEEEEEECCCHHHHCCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCC YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKY EEEEEEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEECCCCCHHHHHCEEEE DILKNKFTTISDENSGYLFLEFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVP EECCCCCEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC LEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLRLLLNAYEIKK HHHHCCEEECEEEEEEECCCCEEEEEECHHHCCCCCCCEEEEEEHHHCCC >Mature Secondary Structure MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDN CEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCC LSISKINNSNLGYVNIGPYCWKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDV CEEEEECCCCCEEEEECCEEECCCCCEEEECCCCCEEECEEEEEEEECCCCCCCCCCCCE TIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLTEVQDEMSKYGANISFVKGSD EEEEEEEEEEECCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC KYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI CEEEEEEEECCCHHHHCCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCC YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKY EEEEEEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEECCCCCHHHHHCEEEE DILKNKFTTISDENSGYLFLEFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVP EECCCCCEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC LEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLRLLLNAYEIKK HHHHCCEEECEEEEEEECCCCEEEEEECHHHCCCCCCCEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA