Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210166

Identifier: 28210166

GI number: 28210166

Start: 408650

End: 409882

Strand: Direct

Name: 28210166

Synonym: CTC00413

Alternate gene names: NA

Gene position: 408650-409882 (Clockwise)

Preceding gene: 28210165

Following gene: 28210167

Centisome position: 14.6

GC content: 22.06

Gene sequence:

>1233_bases
GTGATTACAATACAATCCAAGGAGGTAGGAATTATGAATATAAAAAGTTACAAAAAGTTTATTATTATTTCTATGGGTAT
TTTTGTAATTTTAATTTTATCAGCATGTAATAATTCTAAAAATGATATAATAATAAGTGATAACATTAAAGAAGAATTTA
AAAAACAAGATAAAGATAATTTAAGCATATCAAAAATTAACAATTCAAATTTAGGATATGTAAACATTGGACCTTATTGT
TGGAAGGATGATGAAAATTTTGTTGGAATGCACTCCCATGACAATTATGAAATAAATGATATATATAATGTAAATGTAAA
AACATCTAAAGCAACTAAAGTGGATACACTTGAAGATGTAACAATATTTACTTATATGAACTATGAAGTCAAAAATAATA
AACTTATATATTCAAAAAATAATAAATTATGGATTTATGATTTAATAAATAATAAATCTAAAGAAATATGGGACTTAACA
GAAGTTCAAGATGAAATGAGTAAATATGGTGCTAATATAAGTTTTGTAAAGGGTAGTGATAAATATATAAGTATTGTAAC
TATAAAAAAATATGGTAAAGAAGAATTTAAAAATATAAGAATGTTAGATATTAATACAGGTAAAGTTGTTAAAAGTAATG
ATATGAAAATACCTCTATTTAAGTCATTTATGTATAGCAAAGAAAAAGATGCCTTTTATGTAAGCAAAGGTGAAAATATA
TATGAATATATATATGAATATAATCTTAGTAATCCTAATGAAATAAAAAAGATAGAGAATACCCAAAAAGACTACATGTA
TGATTGTATGGAAATATCTGATGATGGAAAGTATATTTATTCTATAGTTTATGATAAAAAGACAAATAAAAGGCATAGAA
AAAGTAAAATTGTAAAATATGATATTTTGAAAAATAAATTTACTACAATTTCAGATGAAAATAGTGGATATCTTTTTTTA
GAATTTAATCCTAAAACTAATATCATAATTTATACTTATGTAGATAATGAGCATAAAAAGGCATATACGTGTATTGGAAG
AGTTAAAGGGAATAAGATAGAAAATACTAAAAGAGTACCTCTTGAAGATATAGGAGAAGTAAAGTGGAATACAGCATTAA
CAATGATGAATGAAAAAAGTACTAGATTTACTTATATGGTTCCATATCAAAAAATTAATGATAAGAATGATACTTTACGT
TTATTATTAAATGCTTATGAAATTAAAAAATAA

Upstream 100 bases:

>100_bases
ATAGAAAATGGAGAACGAATTAAAGTAACAATAAAGATACCTTGTCTTGGAAACAATTTGGAAATAACTTAACTAATAAC
AGAAACAATTAAATGATATA

Downstream 100 bases:

>100_bases
AGGAGATATTAACATGGGAATTTTTGATGGATTAATGGGAAATGCCTCAGAAGTGAACTCAGAACAAGTAAAAAAAGAAT
ACGCACATATTTTAGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC
WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT
EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI
YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL
EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR
LLLNAYEIKK

Sequences:

>Translated_410_residues
MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC
WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT
EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI
YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL
EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR
LLLNAYEIKK
>Mature_410_residues
MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDNLSISKINNSNLGYVNIGPYC
WKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDVTIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLT
EVQDEMSKYGANISFVKGSDKYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI
YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKYDILKNKFTTISDENSGYLFL
EFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVPLEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLR
LLLNAYEIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48278; Mature: 48278

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDN
CEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCC
LSISKINNSNLGYVNIGPYCWKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDV
CEEEEECCCCCEEEEECCEEECCCCCEEEECCCCCEEECEEEEEEEECCCCCCCCCCCCE
TIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLTEVQDEMSKYGANISFVKGSD
EEEEEEEEEEECCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
KYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI
CEEEEEEEECCCHHHHCCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCC
YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKY
EEEEEEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEECCCCCHHHHHCEEEE
DILKNKFTTISDENSGYLFLEFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVP
EECCCCCEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
LEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLRLLLNAYEIKK
HHHHCCEEECEEEEEEECCCCEEEEEECHHHCCCCCCCEEEEEEHHHCCC
>Mature Secondary Structure
MITIQSKEVGIMNIKSYKKFIIISMGIFVILILSACNNSKNDIIISDNIKEEFKKQDKDN
CEEEECCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCC
LSISKINNSNLGYVNIGPYCWKDDENFVGMHSHDNYEINDIYNVNVKTSKATKVDTLEDV
CEEEEECCCCCEEEEECCEEECCCCCEEEECCCCCEEECEEEEEEEECCCCCCCCCCCCE
TIFTYMNYEVKNNKLIYSKNNKLWIYDLINNKSKEIWDLTEVQDEMSKYGANISFVKGSD
EEEEEEEEEEECCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
KYISIVTIKKYGKEEFKNIRMLDINTGKVVKSNDMKIPLFKSFMYSKEKDAFYVSKGENI
CEEEEEEEECCCHHHHCCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCC
YEYIYEYNLSNPNEIKKIENTQKDYMYDCMEISDDGKYIYSIVYDKKTNKRHRKSKIVKY
EEEEEEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEECCCCCHHHHHCEEEE
DILKNKFTTISDENSGYLFLEFNPKTNIIIYTYVDNEHKKAYTCIGRVKGNKIENTKRVP
EECCCCCEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
LEDIGEVKWNTALTMMNEKSTRFTYMVPYQKINDKNDTLRLLLNAYEIKK
HHHHCCEEECEEEEEEECCCCEEEEEECHHHCCCCCCCEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA