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The map label for this gene is yedE [H]

Identifier: 28210152

GI number: 28210152

Start: 391615

End: 392190

Strand: Direct

Name: yedE [H]

Synonym: CTC00398

Alternate gene names: 28210152

Gene position: 391615-392190 (Clockwise)

Preceding gene: 28210151

Following gene: 28210154

Centisome position: 13.99

GC content: 30.21

Gene sequence:

>576_bases
GTGGGAAGTATATATCCAAAAATCAATAGAAAAATAGGGACAAATAGGATGGAGTCTATAAAAAAATATCTTAAGAGACC
TTGTCCTTATTGGGTAGCAGGAATTTTACTAGGATTGATGAATGTAATTTTACTAGGTACAATTAGAATTAGTTGGCAGA
TAACTAGCGGATTTTTATTATGGGGAATTGGTATTTTACAATGGTTTGGATTAGAACCGTTAAATTGGGAGTATTTTAAG
TATTTTAAATCCTATTATCAACCAGTAATTTTATATGAAAATGTGTTTATTAATCAATATACAATTTTAAACTTAGGTGT
GCTTATAGGATCTTTAATTGCAACTTTATTAGTTTCTCAATTTAAATGGAAAAGAATAAAAAGTAAAAAGCAATTTATCA
TGGCTCTTATAGGTGGAGTGATGATGGGATATGGTACGAGGCTTGCAGTTGGATGCAATATTGGAGCTTTTTTTAGTGGA
ATACCATCTTTTTCTTTACATGCTTGGATTTTTGGAGTCTTTGCTATGTTAGGCACATGGGTAGGGGTTAAGATTTTAAC
GAAATACTTTATATAA

Upstream 100 bases:

>100_bases
TAATTTTACATTCTGACCATAGTTGTGTAGGAGTTGACATAAAAAAGTGGGCATTCCAGCATAAATATCCAGTAAAAGTC
GTTGAACTAGAAGAAGGAGA

Downstream 100 bases:

>100_bases
CAAAAGAGGTTTTTTAACAAAAACCTCTTTTGTTGGAGAGAATAAAATCTACAAACATTTGCTCGTATTCTGTAAAATCA
TAATTTTTCCTATAAGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MGSIYPKINRKIGTNRMESIKKYLKRPCPYWVAGILLGLMNVILLGTIRISWQITSGFLLWGIGILQWFGLEPLNWEYFK
YFKSYYQPVILYENVFINQYTILNLGVLIGSLIATLLVSQFKWKRIKSKKQFIMALIGGVMMGYGTRLAVGCNIGAFFSG
IPSFSLHAWIFGVFAMLGTWVGVKILTKYFI

Sequences:

>Translated_191_residues
MGSIYPKINRKIGTNRMESIKKYLKRPCPYWVAGILLGLMNVILLGTIRISWQITSGFLLWGIGILQWFGLEPLNWEYFK
YFKSYYQPVILYENVFINQYTILNLGVLIGSLIATLLVSQFKWKRIKSKKQFIMALIGGVMMGYGTRLAVGCNIGAFFSG
IPSFSLHAWIFGVFAMLGTWVGVKILTKYFI
>Mature_190_residues
GSIYPKINRKIGTNRMESIKKYLKRPCPYWVAGILLGLMNVILLGTIRISWQITSGFLLWGIGILQWFGLEPLNWEYFKY
FKSYYQPVILYENVFINQYTILNLGVLIGSLIATLLVSQFKWKRIKSKKQFIMALIGGVMMGYGTRLAVGCNIGAFFSGI
PSFSLHAWIFGVFAMLGTWVGVKILTKYFI

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=158, Percent_Identity=35.4430379746835, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 21862; Mature: 21731

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIYPKINRKIGTNRMESIKKYLKRPCPYWVAGILLGLMNVILLGTIRISWQITSGFLL
CCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
WGIGILQWFGLEPLNWEYFKYFKSYYQPVILYENVFINQYTILNLGVLIGSLIATLLVSQ
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKWKRIKSKKQFIMALIGGVMMGYGTRLAVGCNIGAFFSGIPSFSLHAWIFGVFAMLGTW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGVKILTKYFI
HHHHHHHHHCC
>Mature Secondary Structure 
GSIYPKINRKIGTNRMESIKKYLKRPCPYWVAGILLGLMNVILLGTIRISWQITSGFLL
CCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
WGIGILQWFGLEPLNWEYFKYFKSYYQPVILYENVFINQYTILNLGVLIGSLIATLLVSQ
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKWKRIKSKKQFIMALIGGVMMGYGTRLAVGCNIGAFFSGIPSFSLHAWIFGVFAMLGTW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGVKILTKYFI
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]