Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210057

Identifier: 28210057

GI number: 28210057

Start: 279245

End: 279607

Strand: Direct

Name: 28210057

Synonym: CTC00295

Alternate gene names: NA

Gene position: 279245-279607 (Clockwise)

Preceding gene: 28210056

Following gene: 28210058

Centisome position: 9.98

GC content: 21.49

Gene sequence:

>363_bases
TTGGAGGTGATTCTTTTGTTGATAGAAAGTAATAAATATTTTGCTATTAAAGATGAAAGTGGAAAATATTTATTAAAAGA
AATTTCTTTATTTAAATTTAAAGAATTAATGGGTACTATCACCTCTATACAAGATATAAAAATAATAAACAAAGAGCTAG
TCTTACATGTAGAATGTCCAATATGTGGAGATATACATATTTATACATATTCTATTAAAGATTTATTAGTTTATAATGGT
TTAATAGTAGGAGGATGTGAACTTTTAAATAATCCTATATTTTATATAGGAAGTTATGAAAAAGTAAAAAGAAAGATTAC
AACTTATAACGAAATAAATAAAAATATGTATGCTATGTTTTAA

Upstream 100 bases:

>100_bases
CAAATAGCATATGAATGATATTATATTAAATATTAGTTTTAAAATAAGAGGATTTTGAAACTATTTATAGAAAGATAGAT
ATACATGAAAAGATATAATT

Downstream 100 bases:

>100_bases
AAAGTAATTTAGAAGTTAATGTATTTTATTCAAAATAAAGTATAGTTTTATAGTTATAACTATATTTATATAAAACGTGT
AGATTTTACTATGAAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEVILLLIESNKYFAIKDESGKYLLKEISLFKFKELMGTITSIQDIKIINKELVLHVECPICGDIHIYTYSIKDLLVYNG
LIVGGCELLNNPIFYIGSYEKVKRKITTYNEINKNMYAMF

Sequences:

>Translated_120_residues
MEVILLLIESNKYFAIKDESGKYLLKEISLFKFKELMGTITSIQDIKIINKELVLHVECPICGDIHIYTYSIKDLLVYNG
LIVGGCELLNNPIFYIGSYEKVKRKITTYNEINKNMYAMF
>Mature_120_residues
MEVILLLIESNKYFAIKDESGKYLLKEISLFKFKELMGTITSIQDIKIINKELVLHVECPICGDIHIYTYSIKDLLVYNG
LIVGGCELLNNPIFYIGSYEKVKRKITTYNEINKNMYAMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13926; Mature: 13926

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVILLLIESNKYFAIKDESGKYLLKEISLFKFKELMGTITSIQDIKIINKELVLHVECP
CEEEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCHHHEEEECEEEEEEECCC
ICGDIHIYTYSIKDLLVYNGLIVGGCELLNNPIFYIGSYEKVKRKITTYNEINKNMYAMF
CCCCEEEEEEEHHHHHHHCCEEEECHHHHCCCEEEEECHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MEVILLLIESNKYFAIKDESGKYLLKEISLFKFKELMGTITSIQDIKIINKELVLHVECP
CEEEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCHHHEEEECEEEEEEECCC
ICGDIHIYTYSIKDLLVYNGLIVGGCELLNNPIFYIGSYEKVKRKITTYNEINKNMYAMF
CCCCEEEEEEEHHHHHHHCCEEEECHHHHCCCEEEEECHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA