| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is coaE [H]
Identifier: 28199788
GI number: 28199788
Start: 2253607
End: 2254245
Strand: Reverse
Name: coaE [H]
Synonym: PD1921
Alternate gene names: 28199788
Gene position: 2254245-2253607 (Counterclockwise)
Preceding gene: 28199789
Following gene: 28199783
Centisome position: 89.46
GC content: 53.68
Gene sequence:
>639_bases GTGAGGTTGGAGTTGATGAGTGTCTATGCGGTTGGTCTCACTGGAGGGGTCGCTTGCGGTAAGAGCTTGCTGGCGCAGCT GTTCGAGGCGTTAAACACGACGGTTGTTGATGCAGATACAATTGCCCGCCAAGTGGTTGAGCCTGGTCCAGTTCTCAATT GCATCGTTGCTAGGTTTGGTAGCAAGATTTTGCGGGCTGATGGTTGTCTTGATCGTCGTTTTTTGCGGCAACGTGTATTT GCCGATGTGGCCGAACGAAAGGCGTTGGAGGCTATTGTCCATCCGGTGATCCGAGCTAGGTTGAAGCAGGCGGCGGCGGC GGCGGCAGGTCCATATGTGCTAGTCGTCATTCCACTTTTGGCCGAGGCTGGTGGTCGCATTGGATACCCTTGGTTGCAGC GCATTCTTGTCGTGGATGCTATACCGGAAGTACAACACGCACGACTGATGCAGCGTGATTCAATTGACGCTGAGCAGGCT TCCTTGATGATCGCGGCCCAGATTGGCCGCAAAGAGCGCTTAGCTATAGCCGACGATATTGTGTTTAACGATGGAGATCC CGCGCATTTGGGCGGGCAGGTATGCAATTTGGACGCGCGCTATCGCGCTCTTGCTTCTGTTTTTTCTGATGTTGATTAG
Upstream 100 bases:
>100_bases CGATGATTCCGTTTGGACCTTATCTGGCAGTTGGTGGATGGATCGTGTTCTTTTTCGGCGATCAGATCATCCATGCTTAT CTGGAGCTATTAAGTATCGG
Downstream 100 bases:
>100_bases TATCAATTGTTGGCATTACCGAGAGACATCAATTCATCATTGTGACACTTAAATAGTGTACGGTGGTGGATGTTATTTGC GGTTGTTATCTGCAAGAGTA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRLELMSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVF ADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQA SLMIAAQIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD
Sequences:
>Translated_212_residues MRLELMSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVF ADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQA SLMIAAQIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD >Mature_212_residues MRLELMSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVF ADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQA SLMIAAQIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI191252795, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI110227607, Length=167, Percent_Identity=32.3353293413174, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI110227605, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI110227603, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI110227601, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI205277394, Length=179, Percent_Identity=32.4022346368715, Blast_Score=71, Evalue=9e-13, Organism=Escherichia coli, GI1786292, Length=201, Percent_Identity=46.2686567164179, Blast_Score=171, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17554944, Length=196, Percent_Identity=33.6734693877551, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6320402, Length=197, Percent_Identity=37.0558375634518, Blast_Score=88, Evalue=8e-19, Organism=Drosophila melanogaster, GI24644728, Length=182, Percent_Identity=28.021978021978, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24658602, Length=184, Percent_Identity=31.5217391304348, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22896; Mature: 22896
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLELMSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCCHHHHHHHHHHH SKILRADGCLDRRFLRQRVFADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIAAQIGRKERLAIADDI HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHE VFNDGDPAHLGGQVCNLDARYRALASVFSDVD EECCCCCHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRLELMSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCCHHHHHHHHHHH SKILRADGCLDRRFLRQRVFADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIAAQIGRKERLAIADDI HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHE VFNDGDPAHLGGQVCNLDARYRALASVFSDVD EECCCCCHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]