| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is thiG [H]
Identifier: 28199746
GI number: 28199746
Start: 2207004
End: 2207831
Strand: Reverse
Name: thiG [H]
Synonym: PD1877
Alternate gene names: 28199746
Gene position: 2207831-2207004 (Counterclockwise)
Preceding gene: 28199747
Following gene: 28199745
Centisome position: 87.62
GC content: 53.99
Gene sequence:
>828_bases ATGCGTAGAGAGGTAATGCGCCATAATCTCTGGATGAATAATTTCGCTTCCAATGATCCGCTTGTTATTGCTGGTACTGT TTACTCATCGCGGTTGCTCACGGGCACTGGCAAGTTCAAAGACCTTGATGAGACGCGCTTAGCTACTGAGGCGGCGGGGT CTCAAATTGTTACTGTGGCGATTCGCCGGGTGAATATCGGTCAGGATCCGCATCAGCCCAATTTACTGAACGTTCTCTCT CCGGATCGCTACGCGATCCTACCCAATACGGCGGGTTGTTACACAGCTGAGGATGCGGTGCGGACTTGCCGGTTAGCGCG GGAATTGTTGGATGGACACCGGCTCACTAAGCTGGAAGTGCTTGGCGACAAAAAGACGTTGTATCCGGACGTTGTGCAAA CGTTGAAAGCCGCTGAACAGTTGGTTGCCGAGGATTTTCAGGTCATGGTCTATACCAGTGACGATCCGATCTTGGCGAAG CGTCTGGAGGAGATCGGTTGTGTGGCGGTGATGCCGTTAGCTGCACCCATCGGTTCGGGGTTGGGAGTTCAGAATCGCTA CAATTTGCTGGAGATTATTGAGAACGCTCAGGTCCCTATCATCGTGGATGCTGGAGTAGGGACGGCATCTGATGCGGCGA TTGCGATGGAGCTTGGCTGTGATGCGGTATTAATGAATACCGCGATTGCTGGTGCGCGTGATCCGGTGTTGATGGCGAGT GCGATGCGTAAGGCTGTTGAGGCTGGACGTGAAGCGTTCCTGGCGGGACGTATCCCACGGAAGCGTTACGCTGCGGCATC CAGTCCAGTGGAGGGATTGGTTGGATGA
Upstream 100 bases:
>100_bases GATTGTGCCACGCACTTTGCATGTGAATTACGTGCTGCGTGAGGGTGACCGTGTGGAGATTGTTCATGCGCTTGGTGGAG GCTGAAGTGTGTGAGTCGCG
Downstream 100 bases:
>100_bases TGAATCTGCTCAGCAGCGATGGTGTCCAAGTGTTGCCTAGACCCTTCACCCTCAATGAAAGACGCCGTGAAGTGCGTAGT TTTGTATTGCGTCAGGGGCA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRREVMRHNLWMNNFASNDPLVIAGTVYSSRLLTGTGKFKDLDETRLATEAAGSQIVTVAIRRVNIGQDPHQPNLLNVLS PDRYAILPNTAGCYTAEDAVRTCRLARELLDGHRLTKLEVLGDKKTLYPDVVQTLKAAEQLVAEDFQVMVYTSDDPILAK RLEEIGCVAVMPLAAPIGSGLGVQNRYNLLEIIENAQVPIIVDAGVGTASDAAIAMELGCDAVLMNTAIAGARDPVLMAS AMRKAVEAGREAFLAGRIPRKRYAAASSPVEGLVG
Sequences:
>Translated_275_residues MRREVMRHNLWMNNFASNDPLVIAGTVYSSRLLTGTGKFKDLDETRLATEAAGSQIVTVAIRRVNIGQDPHQPNLLNVLS PDRYAILPNTAGCYTAEDAVRTCRLARELLDGHRLTKLEVLGDKKTLYPDVVQTLKAAEQLVAEDFQVMVYTSDDPILAK RLEEIGCVAVMPLAAPIGSGLGVQNRYNLLEIIENAQVPIIVDAGVGTASDAAIAMELGCDAVLMNTAIAGARDPVLMAS AMRKAVEAGREAFLAGRIPRKRYAAASSPVEGLVG >Mature_275_residues MRREVMRHNLWMNNFASNDPLVIAGTVYSSRLLTGTGKFKDLDETRLATEAAGSQIVTVAIRRVNIGQDPHQPNLLNVLS PDRYAILPNTAGCYTAEDAVRTCRLARELLDGHRLTKLEVLGDKKTLYPDVVQTLKAAEQLVAEDFQVMVYTSDDPILAK RLEEIGCVAVMPLAAPIGSGLGVQNRYNLLEIIENAQVPIIVDAGVGTASDAAIAMELGCDAVLMNTAIAGARDPVLMAS AMRKAVEAGREAFLAGRIPRKRYAAASSPVEGLVG
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=254, Percent_Identity=50, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 29598; Mature: 29598
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRREVMRHNLWMNNFASNDPLVIAGTVYSSRLLTGTGKFKDLDETRLATEAAGSQIVTVA CCHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEECCCCCCCCHHHHHHHHHCCCEEEEEE IRRVNIGQDPHQPNLLNVLSPDRYAILPNTAGCYTAEDAVRTCRLARELLDGHRLTKLEV EEEEECCCCCCCCCEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE LGDKKTLYPDVVQTLKAAEQLVAEDFQVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSG ECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCEEEEHHHHHCCCC LGVQNRYNLLEIIENAQVPIIVDAGVGTASDAAIAMELGCDAVLMNTAIAGARDPVLMAS CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHH AMRKAVEAGREAFLAGRIPRKRYAAASSPVEGLVG HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MRREVMRHNLWMNNFASNDPLVIAGTVYSSRLLTGTGKFKDLDETRLATEAAGSQIVTVA CCHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEECCCCCCCCHHHHHHHHHCCCEEEEEE IRRVNIGQDPHQPNLLNVLSPDRYAILPNTAGCYTAEDAVRTCRLARELLDGHRLTKLEV EEEEECCCCCCCCCEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE LGDKKTLYPDVVQTLKAAEQLVAEDFQVMVYTSDDPILAKRLEEIGCVAVMPLAAPIGSG ECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCEEEEHHHHHCCCC LGVQNRYNLLEIIENAQVPIIVDAGVGTASDAAIAMELGCDAVLMNTAIAGARDPVLMAS CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHH AMRKAVEAGREAFLAGRIPRKRYAAASSPVEGLVG HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]