| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199478
Identifier: 28199478
GI number: 28199478
Start: 1850704
End: 1851294
Strand: Reverse
Name: 28199478
Synonym: PD1599
Alternate gene names: NA
Gene position: 1851294-1850704 (Counterclockwise)
Preceding gene: 28199479
Following gene: 28199477
Centisome position: 73.47
GC content: 62.77
Gene sequence:
>591_bases ATGACCACCGCCGAATACGCCAAGCACCGCGGCGTCAGCGACTCCTACATCCGCCGGATGCGGCGCAAAGGCAATGTGAT CCTGGGCGAGGATGGCCGCATCCACGTGAACGCCAGTGACACCCTGCTGGATGGCATGACCCATCCCGTGCAGGGCGGCA AGCGCGGCATGACCGACCCTCACGCCGCCGCCGTACCCACCTTCACCGTGATGACCCCACAGGGCATTCCGGTGCAAGAA GCGGTCCGCCGCGAGCGCGTCGCGCGTGCACTCATGGCTGAACTTGATCTGGGCAAGCAAGCCGAACAACTGACCTGCGT AGATGAGGTCAACCGCGCCGTCTTCACCCTGGTACGCCAAGCACTGAACCAGCTCCGCGGCATGAGTGGCCGACTACGCA AGACACTGGCGGCAGAGACCGATGCGGGCAAAGTCACCCAGATCATTGATACCGACGTCGCCCACATCTGCAAGCAAATG CAGGACGCCGCCACGACCCTGCTGAAAACCAACACACCCGACGCCGAACCCGTCCAAGCCAACGACACCAACGACACCCT CGCATTCGAGGAAGAAGGAGTATCCGGATGA
Upstream 100 bases:
>100_bases TGCACCGCGGGCAATTCGGACCCCGTTTTGCGTGCATGTCCTGGTTCCAGATTTTGGTTCCGGTAGGGGCGGGGGGGTTC CGATGGGTTCTGTGACGACC
Downstream 100 bases:
>100_bases GCCTCGACGACTTCCCCGACATCCAACTGGCCAACGCTTACCACACCGTTTCCACCGCCTGGCAGCACGCCTGGGAAGTC CCCCCGCGCCTGGAGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQGIPVQE AVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQM QDAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG
Sequences:
>Translated_196_residues MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQGIPVQE AVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQM QDAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG >Mature_195_residues TTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQGIPVQEA VRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQ DAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21353; Mature: 21221
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDP CCCHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC HAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQ CHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTLLKTNTPDAEPVQA HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NDTNDTLAFEEEGVSG CCCCCCEEECCCCCCC >Mature Secondary Structure TTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDP CCHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC HAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQ CHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTLLKTNTPDAEPVQA HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NDTNDTLAFEEEGVSG CCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA