| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
Click here to switch to the map view.
The map label for this gene is 28199476
Identifier: 28199476
GI number: 28199476
Start: 1848295
End: 1848561
Strand: Reverse
Name: 28199476
Synonym: PD1597
Alternate gene names: NA
Gene position: 1848561-1848295 (Counterclockwise)
Preceding gene: 28199477
Following gene: 28199475
Centisome position: 73.36
GC content: 61.05
Gene sequence:
>267_bases GTGGCTTCCCAACCAACACCAGAGAGACATATGAGCCTTGCTACCGACCAAGTTGCACTCCTAAAAGACGCCTACCGCAA AGTCCTGCTGGGCCAATCCGTCCGGTATGGCGAACGCCAAGTGACCCGCGCCGATGCCAAATGGATTAGCGATGAACTGG ACAAATGGCTGCGCCGCGCCGCCGCAGAAGCGGCCCCCTCCACGAGCGGCACCGTTCGCATTGCCATTGCCGACTTCCGC AGAGACAGCGGCGCAGACGCACCATGA
Upstream 100 bases:
>100_bases CCACCGCTTCCTAACAGCGGCTTTGGCTCCGACCGTTGGAACAAGCGTCTATGAACCGCACGACGCGCCGCACCAAAGCC CCCATCACCAGGCTTACCGA
Downstream 100 bases:
>100_bases CCACCGCATCCCCGCGCCTGCACCGCCTCGTTGCCGCCTTCGACCGCGGCCTCCTCCAGCTTGCCCCAGCCTGGGCTGCC TCCCGTGCCCAGAGCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MASQPTPERHMSLATDQVALLKDAYRKVLLGQSVRYGERQVTRADAKWISDELDKWLRRAAAEAAPSTSGTVRIAIADFR RDSGADAP
Sequences:
>Translated_88_residues MASQPTPERHMSLATDQVALLKDAYRKVLLGQSVRYGERQVTRADAKWISDELDKWLRRAAAEAAPSTSGTVRIAIADFR RDSGADAP >Mature_87_residues ASQPTPERHMSLATDQVALLKDAYRKVLLGQSVRYGERQVTRADAKWISDELDKWLRRAAAEAAPSTSGTVRIAIADFRR DSGADAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9713; Mature: 9582
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQPTPERHMSLATDQVALLKDAYRKVLLGQSVRYGERQVTRADAKWISDELDKWLRRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAEAAPSTSGTVRIAIADFRRDSGADAP HHHCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure ASQPTPERHMSLATDQVALLKDAYRKVLLGQSVRYGERQVTRADAKWISDELDKWLRRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAEAAPSTSGTVRIAIADFRRDSGADAP HHHCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA