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The map label for this gene is rsgA [H]

Identifier: 28199464

GI number: 28199464

Start: 1833517

End: 1834542

Strand: Reverse

Name: rsgA [H]

Synonym: PD1585

Alternate gene names: 28199464

Gene position: 1834542-1833517 (Counterclockwise)

Preceding gene: 28199465

Following gene: 28199461

Centisome position: 72.81

GC content: 58.48

Gene sequence:

>1026_bases
ATGATTGAGCCTGTTGTTGGGTATCGGATGCTTCAAGCCATTGGCTGGCCTTGGCCGGGGCCGCCTGCTGATTCGGCGTG
GCAGGCGATGTGTGCGATGTATTCGCAGTGCCGTCCGGCACGGGTGATTGAGCAGCATCGGTCCGGTTATGTGGTGGCTG
AGGCGCCGGAGGTCCCCATTAAGGTCGAGTCGCTGCCAGCGTGGCAGCGCCGCAGTTTCCCGCCCCATGAGCGCGCGGTT
GTGGGGGATTGGGTGTTGTTGGATGGTCGTCGCATCGTGGCGTTGTTGCCGCGGCGTACAGTCATTAAGCGTTTGGCGGC
GGGGGAACATTACCGGCAGCAGCTGATTGCCGCCAATCTGGATACTGCATTTATCGTTTGTGGATTGGATGGTGATTTTA
ATCCACGTCGGATTGAGCGTTACTGCGTGTTGATTGCTAGTGGTGGTGTTGAGCCGGTGGTGGTGCTCACGAAGGTTGAT
CTGTGTGTTGATGTCGCGGCGGCGGTGGCGGTGTTGCGTGAGCATTCTTCTCAGGCATTGGCCGTGGTGGCCGTTGATGC
GCGCAAAGCGGAGCCTGTTGTGGCGCTGTATCCGTGGTTATTACCGGGGCGTACGGTGGCGTTGCTCGGTTCATCGGGTG
CGGGCAAGTCGACGTTGACGAACACGTTGCTTGGCGAGCAGCGTATGAAGGTTGGTGAGGTGCGTCAAAGGGATTCGCGT
GGCCGACATACGACTACGCATCGGGCCTTATTGCCGTTGCCATCCGGGGCTTGTTTGATTGATACCCCAGGGATGCGTGA
GCTTAAGTTCACCGGTGAAGAGGATCTTGTCGAAGAGTTTGCTGACATTGAGTTGCTGGCGACGCAGTGCCGTTTTCGTG
ATTGTGCCCATCAGGCTGAGCCAGGGTGTGCGGTGCGTGCGGCGATTGGGTGTGGGACGTTGGATCCGCAGCGTCTGCAT
CATTACTTTAAGTTGCGTGGTGAGATTGTCGGGGCGGCAGACAGGTCGATGTTGCGGCGTTATTGA

Upstream 100 bases:

>100_bases
TATGGGGATGGGTGTTTAAGGTGTTGTGGCAACAATCCGGTGATAGGCACGGCACAGCATTTTTCAAAAAGACAATCTGT
GCCTATGTTGGAATGGGTGC

Downstream 100 bases:

>100_bases
GTGTGGTTGCTCTCCTTGAGGTTCTTCGAATGCATCTGCATTGTCATGACCGTTGTCGCATTCCGTCGCTGTGCGTCTGC
TGTGTATCCTCGTGGAGTGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIEPVVGYRMLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAV
VGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVD
LCVDVAAAVAVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSR
GRHTTTHRALLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLH
HYFKLRGEIVGAADRSMLRRY

Sequences:

>Translated_341_residues
MIEPVVGYRMLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAV
VGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVD
LCVDVAAAVAVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSR
GRHTTTHRALLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLH
HYFKLRGEIVGAADRSMLRRY
>Mature_341_residues
MIEPVVGYRMLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAV
VGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVD
LCVDVAAAVAVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSR
GRHTTTHRALLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLH
HYFKLRGEIVGAADRSMLRRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=218, Percent_Identity=31.651376146789, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 37565; Mature: 37565

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPVVGYRMLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPI
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCE
KVESLPAWQRRSFPPHERAVVGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANL
EECCCCCHHHCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCC
DTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAVAVLREHSSQAL
CEEEEEEECCCCCCHHHEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
AVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSR
EEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GRHTTTHRALLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAE
CCCCCCCEEEEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGCAVRAAIGCGTLDPQRLHHYFKLRGEIVGAADRSMLRRY
CCCEEEEEECCCCCCHHHHHHHHHHHHHEECHHHHHHHHCC
>Mature Secondary Structure
MIEPVVGYRMLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPI
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCE
KVESLPAWQRRSFPPHERAVVGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANL
EECCCCCHHHCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCC
DTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAVAVLREHSSQAL
CEEEEEEECCCCCCHHHEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
AVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSR
EEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GRHTTTHRALLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAE
CCCCCCCEEEEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGCAVRAAIGCGTLDPQRLHHYFKLRGEIVGAADRSMLRRY
CCCEEEEEECCCCCCHHHHHHHHHHHHHEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]