| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199391
Identifier: 28199391
GI number: 28199391
Start: 1756592
End: 1757158
Strand: Reverse
Name: 28199391
Synonym: PD1511
Alternate gene names: NA
Gene position: 1757158-1756592 (Counterclockwise)
Preceding gene: 28199392
Following gene: 28199390
Centisome position: 69.73
GC content: 38.45
Gene sequence:
>567_bases ATGGTGAACCTTACATCTTTGGAGCGTGTTTTGAACATTAAACTCAAAGAATATAAAGAATATATTGCTGCGCATCATTA TTATGTTATTGGAGTATTTATCTTCTTGCCGATGATTGTCAGTAAAATCGCAATATTGATCGGGGTGGCCAATATTGGTT TTGTTTCCCCATGGGAAATATCTTATCGGACGGCATTCGGCGGTGCCGAGGGGTATACCCTGACAATGGTGATGTATTGG GTGATGTCGCCTCTTGCGTTTTTGTGGTTACATTCACAAGCGAATTACCCAGGTATGTCTTTGAGAAAAGCGATTATTCT GCTTCCTGCAGCATGGTTTCTGTCAATTATTTGTGGAGGTGGCATGATTGAAAATATGTCTGTTGACTATCTTACTAAGG CATCAGCTTATACTGTGGGAAGACGATTTTCAGGTCAACTATTTTTCTCATTGGGGGAATCGCATTTTGGTTTTTGTATG ATATACGCGATGCTTGTTTTTATGTGTGTTGCAATTTGGTATTGCACATTATCTTTAACGTTGCGTTTAATTTTTAAGAG ACTTTAA
Upstream 100 bases:
>100_bases ATCAAACCAGCGCTTTGAGGAGTGCCTAGATCACTCCGAAGGAATCTATTTAGTATGTTTATTGACAGAAAGACACCACG GAGTGTGTTGAGATTCTTTC
Downstream 100 bases:
>100_bases TAGGAGTGATAGCGTCATGAGTAATAATACGGAAGATACAGGTAAAGCAACATCTCATCAGATGGATGACAGTACTTTCA ATGAGTGGAGCGAAGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVNLTSLERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYW VMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCM IYAMLVFMCVAIWYCTLSLTLRLIFKRL
Sequences:
>Translated_188_residues MVNLTSLERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYW VMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCM IYAMLVFMCVAIWYCTLSLTLRLIFKRL >Mature_188_residues MVNLTSLERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEISYRTAFGGAEGYTLTMVMYW VMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGGGMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCM IYAMLVFMCVAIWYCTLSLTLRLIFKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21368; Mature: 21368
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLTSLERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE SYRTAFGGAEGYTLTMVMYWVMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGG EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLVFMCVAIWYCTLSLT CEECCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRLIFKRL HHHHHHHC >Mature Secondary Structure MVNLTSLERVLNIKLKEYKEYIAAHHYYVIGVFIFLPMIVSKIAILIGVANIGFVSPWEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE SYRTAFGGAEGYTLTMVMYWVMSPLAFLWLHSQANYPGMSLRKAIILLPAAWFLSIICGG EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GMIENMSVDYLTKASAYTVGRRFSGQLFFSLGESHFGFCMIYAMLVFMCVAIWYCTLSLT CEECCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRLIFKRL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA