| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199388
Identifier: 28199388
GI number: 28199388
Start: 1754993
End: 1755241
Strand: Reverse
Name: 28199388
Synonym: PD1508
Alternate gene names: NA
Gene position: 1755241-1754993 (Counterclockwise)
Preceding gene: 28199389
Following gene: 28199387
Centisome position: 69.66
GC content: 54.62
Gene sequence:
>249_bases ATGGAGATGGAACTCAAGCAGACACCCCGCCACACCCAGGCAACGGCGCCCTCATTCATCACCGCACCCTGTGTCGTTGC AGCGGCTTGGCCGATCACCTGCACTACCGCATCACCCCCGCTACATCAACGTACAACGCTGCCCCAGCGTATCACTGCAT CAAACCAGCGCTTTGAGGAGTGCCTAGATCACTCCGAAGGAATCTATTTAGTATGTTTATTGACAGAAAGACACCACGGA GTGTGTTGA
Upstream 100 bases:
>100_bases AGGTGATGGGTGAGATAAAAATCACCCAATGGTTGGGCACAAACAAAAAAGTGTGATAGAAATAACGCAATTGAACCGAT AAGGAACTGAGTCACCCGCT
Downstream 100 bases:
>100_bases GATTCTTTCATGATGAACCTTACATCTTTGGAGCGTGTTTTGAACATTAAACTCAAAGAATATAAAGAATATATTGCTGC GCATTCTCGTTCTGTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MEMELKQTPRHTQATAPSFITAPCVVAAAWPITCTTASPPLHQRTTLPQRITASNQRFEECLDHSEGIYLVCLLTERHHG VC
Sequences:
>Translated_82_residues MEMELKQTPRHTQATAPSFITAPCVVAAAWPITCTTASPPLHQRTTLPQRITASNQRFEECLDHSEGIYLVCLLTERHHG VC >Mature_82_residues MEMELKQTPRHTQATAPSFITAPCVVAAAWPITCTTASPPLHQRTTLPQRITASNQRFEECLDHSEGIYLVCLLTERHHG VC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9144; Mature: 9144
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMELKQTPRHTQATAPSFITAPCVVAAAWPITCTTASPPLHQRTTLPQRITASNQRFEE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHH CLDHSEGIYLVCLLTERHHGVC HHCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MEMELKQTPRHTQATAPSFITAPCVVAAAWPITCTTASPPLHQRTTLPQRITASNQRFEE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHH CLDHSEGIYLVCLLTERHHGVC HHCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA