Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199387

Identifier: 28199387

GI number: 28199387

Start: 1754438

End: 1754983

Strand: Reverse

Name: 28199387

Synonym: PD1507

Alternate gene names: NA

Gene position: 1754983-1754438 (Counterclockwise)

Preceding gene: 28199388

Following gene: 77747700

Centisome position: 69.65

GC content: 39.93

Gene sequence:

>546_bases
ATGATGAACCTTACATCTTTGGAGCGTGTTTTGAACATTAAACTCAAAGAATATAAAGAATATATTGCTGCGCATTCTCG
TTCTGTTCTTGTGGTGTTTTTCTTCTTGCCGATGATTGTCAGTAAAATCGCGATATTGATCGGGGTGACCAATATTGGTT
TTGTGTTGTCATGGGAAACAGCGTGTCGCGCGGCATTTGGTAGTGCCGAGGGATATTCTCTGACCGTGCTCCTCTATTGG
CTCATGTCACCTCTTGCGTTTTTGTGGATATTTTCGCAAGTGAATTACCAGAGTACGTCTTTTATAAAAATGATGATCAT
CGTTCCTTCGTGGTGGTTGATAATCATTGCTCTTGGGGTGATTGTTTTTGGTGAAGTCAAGCCTTCTTTTCTTGAATATT
CAAGTTTTTCTCGGGCAAGGATTTTCTCACTTATGAGGTGGCATTGGGGTTTCTGCATGCTATATGGGGGGCTTGTTTTT
TGTTTTTGTACAATGATTTATGGCGCATCATATTTAACGTTGCGTTTAATTTCTAACAGGCTTTAA

Upstream 100 bases:

>100_bases
ATCAAACCAGCGCTTTGAGGAGTGCCTAGATCACTCCGAAGGAATCTATTTAGTATGTTTATTGACAGAAAGACACCACG
GAGTGTGTTGAGATTCTTTC

Downstream 100 bases:

>100_bases
TGAGGAGTGTTATCGTCATGAGTGACAATACGGCAGGTAAAGCCGCATCTGATCTAGTTGATTACAATAATATAAATAAT
TTCAGTTCAGCCTATGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MMNLTSLERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYW
LMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVF
CFCTMIYGASYLTLRLISNRL

Sequences:

>Translated_181_residues
MMNLTSLERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYW
LMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVF
CFCTMIYGASYLTLRLISNRL
>Mature_181_residues
MMNLTSLERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYW
LMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVF
CFCTMIYGASYLTLRLISNRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20858; Mature: 20858

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLTSLERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWET
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHH
ACRAAFGSAEGYSLTVLLYWLMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMIYGASYLTLRLISNR
HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MMNLTSLERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWET
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHH
ACRAAFGSAEGYSLTVLLYWLMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMIYGASYLTLRLISNR
HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA