| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is yceG [C]
Identifier: 28199379
GI number: 28199379
Start: 1739666
End: 1740733
Strand: Reverse
Name: yceG [C]
Synonym: PD1499
Alternate gene names: 28199379
Gene position: 1740733-1739666 (Counterclockwise)
Preceding gene: 28199380
Following gene: 77747699
Centisome position: 69.08
GC content: 53.65
Gene sequence:
>1068_bases GTGCTGGTGGCACCGATGATGTTGGTGTTGATCGTTTTACTGGGACTCATTGCACGGCCTGATTTAAAGCATTATGTGCC AGGCTGGAAGTATTACGAGCATTATCAGCATTTTGCGCATACCCCGCTCAGTGCGAGCGCGTCTAGTGTGGAGATTGCAC GTGGTGATTCTCTGCATACGGTCTTGCTTAAATTACGTAAGGCTGGGGTTCAAAGCGGTAGTGACTTGGAGTGGCAACTA TTGGCATATCAGGTAGGTGCTGCCGGTAATTTGAAGTTCGGCGATTACGCATTGGCGCCTGCGGTTTCTCCACATGATTT GCTACAGCGTATGCGTCATGGCAAGGGTGAGCATTACCGCTTCACTATCGTTGAGGGTTGGAACATTCGTCAGCTGCGTG CTGCGTTGCGCCAAGCTACTCCTTTGGTGCATCGTGCAGGCATGCTGGATGATGCGACATTAATGGCTCAATTGGGTTTC CCGGGTGAACATCCGGAAGGGCGTTTTTTGCCTGAGACCTATTTGTACCAACGTGGAGACAGCGACTTGGACGTTTTGCG TCGTGCCCATGCAGCGATGCAAAAGGCGCTTGCCGAGACGTGGGCGGCGCGTGATCCGGCACTGAAGTTGCATACTCCTG ATGAGGCGCTGATTCTTGCTTCGATTGTGGAGAAAGAAAGTGGCTTGTCTACCGAGCGGCCGAAGATTGCTGGAGTGTTT CTGCACCGCATTGCGCGAGGGATGCGATTACAGGCAGATTCGACGGTGATCTATGGGCTGGGCAGCATCTACGACGGTAA TATCCGCAAGCGTGATTTAAAGACCCCCACCCCCTATAACACTTACGTCCACACCGGATTGACGCCGACTCCAATTTCAA TGCCTGGCCAGGATGCATTGCGTGCTGTGACGCGTCCTGCAGTGGGCGACGCGCTGTATTTTGTTGCCCTTGGCGATGGG AGTGGCGGACATACGTTTTCCTCATCACTGCAGCAGCATAACGCGGCGGTGGCGCGTTACTTGCAACGCCTTCGTGAACG CGAAAGCAAAACGAAGGAGCGGCAATGA
Upstream 100 bases:
>100_bases GAACGTTAGTTTTCGGTGATGCTGATACGCGCGTTATGCTGTCTGGCCTTGAAGGCTTGACGAGGTGGACTTGGTGGGAC GCAAACGCGGATGTCTAGTC
Downstream 100 bases:
>100_bases ATGGTGTTGATTGCCTAGGAAATTCATGGATGATGTCGGCACTTACCCCTTGGCAGCAGCGTGCTTACGATCAGATGGTG GCGGCGTTGGATGCTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQSGSDLEWQL LAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGF PGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTERPKIAGVF LHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDALYFVALGDG SGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ
Sequences:
>Translated_355_residues MLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQSGSDLEWQL LAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGF PGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTERPKIAGVF LHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDALYFVALGDG SGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ >Mature_355_residues MLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQSGSDLEWQL LAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGF PGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTERPKIAGVF LHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDALYFVALGDG SGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=263, Percent_Identity=39.1634980988593, Blast_Score=197, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39354; Mature: 39354
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHT CCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHH VLLKLRKAGVQSGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYR HHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEE FTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGFPGEHPEGRFLPETYLYQRGD EEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCC SDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTERPKIAGVF CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHH LHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDAL HHHHHHCCEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH RAVTRPAVGDALYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHT CCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHH VLLKLRKAGVQSGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYR HHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEE FTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGFPGEHPEGRFLPETYLYQRGD EEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCC SDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTERPKIAGVF CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHH LHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDAL HHHHHHCCEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH RAVTRPAVGDALYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]