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The map label for this gene is yfhQ [C]

Identifier: 28199373

GI number: 28199373

Start: 1735291

End: 1736049

Strand: Reverse

Name: yfhQ [C]

Synonym: PD1492

Alternate gene names: 28199373

Gene position: 1736049-1735291 (Counterclockwise)

Preceding gene: 28199377

Following gene: 28199371

Centisome position: 68.9

GC content: 56.52

Gene sequence:

>759_bases
ATGTTTGCATTCCCGCGTCTGCGTTTTGTCCTTGTTGGTACCCAGCATCCAGGCAACATCGGTGCGGCTGCCCGCGCCAT
GAAGACGATGGGGATATCGCGTTTGGTCCTGGTTGCGCCCGAATGCCAGCTCGATGAACATGCTTACCGGCGTTCGGCAG
GCGCTGAAGATGTCCTGGAGGCCGCCTCCGTGCATACCGTTCTGGCCGATGCCGTGGCCGATTGCACCTTTGTGCTTGGA
TGCACCGCACGCACGCGCCGTGTTGCCTTTGAGGAACTACGTCCGGCAGCAGCGGCATCCCAGATCCTGACGAACATTAA
CGCAGCAGGTGAAGTCGCGTTGTTGTTTGGACGCGAACGCACCGGACTGACCAACGAAGAACTGCAGCTATGCCATGTTG
CCGTGCATATTCCTGCTGATCCACTGTTTAGCTCATTGAACCTGGCCGCTGCCGTGCAGATCTTGGCCTATGAAATCCGT
TTGGCATCTCTTGATGCACCCTCCGCGCCCCTCCATTCAACCTCAGGATTCCGCAAGACACCCGCCAGCCATGCCCAACT
GGAAGGTTTATTCGGCCAATTCAAACAGACCTTGGATGAGATCGATTTTCACAAAGGGCGCGCCCCGGAATCGGCAATGC
GCAAATTGCGTCGCCTCTTTGCCAAGGCCGAACTAACCCAGCAAGAAATAAGATTACTTCGGGGAGTACTCTCCGATGTC
CAACGTATCGTCATGCTGAAACGTCAGCGCGACACCTGA

Upstream 100 bases:

>100_bases
GTGAGAAGAGTGGATGGTTGAGTAGGGGGAGGAACAATCCAGTGCGTCGCCCGTCGGGCAGTTTACCATGCAGCACTACA
CTTCTTTGGTCTCCCTCACC

Downstream 100 bases:

>100_bases
ACCATCGCATCGCGTCCCGGAGTTTTTCATCTGGTGAGCGTGATGCGCATGGATCACCACAGAGACCGTCACAGACAGCA
TGACCTTCGTTGAGCCGCGC

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLEAASVHTVLADAVADCTFVLG
CTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRERTGLTNEELQLCHVAVHIPADPLFSSLNLAAAVQILAYEIR
LASLDAPSAPLHSTSGFRKTPASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQEIRLLRGVLSDV
QRIVMLKRQRDT

Sequences:

>Translated_252_residues
MFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLEAASVHTVLADAVADCTFVLG
CTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRERTGLTNEELQLCHVAVHIPADPLFSSLNLAAAVQILAYEIR
LASLDAPSAPLHSTSGFRKTPASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQEIRLLRGVLSDV
QRIVMLKRQRDT
>Mature_252_residues
MFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLEAASVHTVLADAVADCTFVLG
CTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRERTGLTNEELQLCHVAVHIPADPLFSSLNLAAAVQILAYEIR
LASLDAPSAPLHSTSGFRKTPASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQEIRLLRGVLSDV
QRIVMLKRQRDT

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=238, Percent_Identity=42.8571428571429, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1790865, Length=154, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27547; Mature: 27547

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLE
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHCCCHHHHHH
AASVHTVLADAVADCTFVLGCTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRER
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TGLTNEELQLCHVAVHIPADPLFSSLNLAAAVQILAYEIRLASLDAPSAPLHSTSGFRKT
CCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQEIRLLRGVLSDV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRIVMLKRQRDT
HHHHHHHHHCCC
>Mature Secondary Structure
MFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLE
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHCCCHHHHHH
AASVHTVLADAVADCTFVLGCTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRER
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TGLTNEELQLCHVAVHIPADPLFSSLNLAAAVQILAYEIRLASLDAPSAPLHSTSGFRKT
CCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQEIRLLRGVLSDV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRIVMLKRQRDT
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]