| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199291
Identifier: 28199291
GI number: 28199291
Start: 1640075
End: 1640455
Strand: Reverse
Name: 28199291
Synonym: PD1407
Alternate gene names: NA
Gene position: 1640455-1640075 (Counterclockwise)
Preceding gene: 28199292
Following gene: 28199290
Centisome position: 65.1
GC content: 48.29
Gene sequence:
>381_bases TTGATGGAGACACTGATCGGATTGTGGACATGCACCGCTGATACTTACGCCAAGCGTGTAACGCTTCTGCTTTTCACTCC TGGTGTTGATGAGCAGAGCGGTGCACTGTTCAACAGTAAGGACTTGGTGATCTTGACGTTGGTAGGATTGATTAATTCAC ATAGTCGTACGTTTATGTCGTACGTTTATGGTTGCGCCAGAGGTGTTGGTAGTACGGACAGGTGTCTAAGCATGAGTTTT TCGCAGGCAAGGCAGCTCGTTCTTTCATCCGCGATGTCCGATGATTCCATCATGAGCTACTTAGTTTTATTCGGCCCGAG TCGGCCTAATTGTGATTGCAGCCAGTCAGGCGCGGCATCACATCTTCTCTTCGATGCATAA
Upstream 100 bases:
>100_bases TAAGTGTTATCTCCACGCCACGTTTTTTTGCCTGAATCTCGGTCCCATCAAGATCAATATTCGTGGCAACCTCTTCGGCA AGAATTCGCTGAAATCGTGG
Downstream 100 bases:
>100_bases CCATTCATTGACATGTATGATGAACGAAGGTGTTAGGTTCCTACCGTTTGCGTGGTCCCGTTTGGGTACAGGCGTTCTTC CGGTGCGATGATTGGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MMETLIGLWTCTADTYAKRVTLLLFTPGVDEQSGALFNSKDLVILTLVGLINSHSRTFMSYVYGCARGVGSTDRCLSMSF SQARQLVLSSAMSDDSIMSYLVLFGPSRPNCDCSQSGAASHLLFDA
Sequences:
>Translated_126_residues MMETLIGLWTCTADTYAKRVTLLLFTPGVDEQSGALFNSKDLVILTLVGLINSHSRTFMSYVYGCARGVGSTDRCLSMSF SQARQLVLSSAMSDDSIMSYLVLFGPSRPNCDCSQSGAASHLLFDA >Mature_126_residues MMETLIGLWTCTADTYAKRVTLLLFTPGVDEQSGALFNSKDLVILTLVGLINSHSRTFMSYVYGCARGVGSTDRCLSMSF SQARQLVLSSAMSDDSIMSYLVLFGPSRPNCDCSQSGAASHLLFDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13636; Mature: 13636
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMETLIGLWTCTADTYAKRVTLLLFTPGVDEQSGALFNSKDLVILTLVGLINSHSRTFMS CCCHHHHHHHCCHHHHHHEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHH YVYGCARGVGSTDRCLSMSFSQARQLVLSSAMSDDSIMSYLVLFGPSRPNCDCSQSGAAS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC HLLFDA EEEECC >Mature Secondary Structure MMETLIGLWTCTADTYAKRVTLLLFTPGVDEQSGALFNSKDLVILTLVGLINSHSRTFMS CCCHHHHHHHCCHHHHHHEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHH YVYGCARGVGSTDRCLSMSFSQARQLVLSSAMSDDSIMSYLVLFGPSRPNCDCSQSGAAS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC HLLFDA EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA