| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199274
Identifier: 28199274
GI number: 28199274
Start: 1613502
End: 1613780
Strand: Reverse
Name: 28199274
Synonym: PD1390
Alternate gene names: NA
Gene position: 1613780-1613502 (Counterclockwise)
Preceding gene: 28199275
Following gene: 28199273
Centisome position: 64.04
GC content: 39.07
Gene sequence:
>279_bases GTGCATGATTTATTAATGTATAAAATATTTCGCAGGTATCGCGGTCTGTTGAGTATGCAGCTAAATCGGATGATTGATGT ATGTGTCGTTACTAATTTTTTGATTGTGAGTTTCTGTAAGAGTCTTGGAAATAGCGATAGTCAATCCAGGCGGATTAATG TGTTGTTGCACTATCTGCTTGGGGCATTGTGGATTCTATGCCTCAGTTACATTAAATGGATGTTGCCAATGTCGTGTTTA GTTCAGGTGCTGTGGCACAAGGATAAGGTGATGATATGA
Upstream 100 bases:
>100_bases ATGGTGTCTTTTTGTTTTGTGTTGTTTCCAGTATGTCGAAGCGATTGAATAGGTTTTTTTCAGTGGAGCACTATTGGTGG CGAATAAATTTTTTTCACAG
Downstream 100 bases:
>100_bases GTGACGGTGTGGTGACTGTATCTACGGTGTCCGAGCGTAGTTTGGCTTCACGTGCGGTTGGCGGTGCCGTGGTGACGATG CTTGGGCAGGGGGCGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MHDLLMYKIFRRYRGLLSMQLNRMIDVCVVTNFLIVSFCKSLGNSDSQSRRINVLLHYLLGALWILCLSYIKWMLPMSCL VQVLWHKDKVMI
Sequences:
>Translated_92_residues MHDLLMYKIFRRYRGLLSMQLNRMIDVCVVTNFLIVSFCKSLGNSDSQSRRINVLLHYLLGALWILCLSYIKWMLPMSCL VQVLWHKDKVMI >Mature_92_residues MHDLLMYKIFRRYRGLLSMQLNRMIDVCVVTNFLIVSFCKSLGNSDSQSRRINVLLHYLLGALWILCLSYIKWMLPMSCL VQVLWHKDKVMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10939; Mature: 10939
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDLLMYKIFRRYRGLLSMQLNRMIDVCVVTNFLIVSFCKSLGNSDSQSRRINVLLHYLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GALWILCLSYIKWMLPMSCLVQVLWHKDKVMI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHDLLMYKIFRRYRGLLSMQLNRMIDVCVVTNFLIVSFCKSLGNSDSQSRRINVLLHYLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GALWILCLSYIKWMLPMSCLVQVLWHKDKVMI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA