| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is aroA [H]
Identifier: 28199240
GI number: 28199240
Start: 1576935
End: 1578299
Strand: Reverse
Name: aroA [H]
Synonym: PD1356
Alternate gene names: 28199240
Gene position: 1578299-1576935 (Counterclockwise)
Preceding gene: 28199241
Following gene: 28199239
Centisome position: 62.64
GC content: 54.36
Gene sequence:
>1365_bases TTGTATTGTCGTCGCTCTCAGTTGAAGAAACCTAGTATGAGTCATAGAACGCATTACTATTGGATCGCACACCAGGGTAC CCCACTGCATGGCGTCCTGAGTATCCCCGGCGATAAATCAATCTCTCATCGTGCAGTCATGTTTGCTGCCCTTGCGGATG GCACGTCACGTATTGATGGCTTTCTTGAGGCGGAGGATACGCGCTCTACAGCAGCGATCTTGGCCCGATTGGGTGTGCGT ATCGAAACTCCCTCATTCACGCAGCGCATCGTCCATGGTGTTGGTGTGGATGGACTCCAGGCATCGGATATTGCCCTGGA TTGTGGCAATGCAGGCACTGGCATGCGCCTGCTCGCTGGTTTGCTGGTAGCGCAGCCTTTTGACAGCGTTTTAGTCGGAG ATGCATCACTGTCCAAGCGACCGATGCGACGTGTGACGGATCCGCTGTCACAGATGGGCGCACGTATCGATACCAGCGAC GATGGTACTCCACCGCTGCGTATTTACGGTGGTCAATTACTCCGCGGTATCGATTTTATCTCCCCAGTGGCCAGTGCTCA GATCAAGTCAGCGGTGTTGCTGGCTGGATTGTATGCACGTAACGAAACGGTAGTGCGTGAACCGCACCCGACGCGTGATT ACACCGAGCGTATGCTCACTGCGTTTGGTGTGGACATTGATGTTTCCACAGGGTGCGTGCGGTTGCGTGGTGGGCAACGG TTATGTGCTACCAATATTACAATCCCGGCTGATTTTTCCTCAGCTGCGTTTTATCTGGTTGCAGCCAGCGTGATTCCTGG CTCTGATATCACCCTGCGTGCTGTTGGACTCAATCCGCGTCGTATTGGTTTGTTAACTGTGTTGCGGCTGATGGGGGCAG ATATTGTTGAATCCAATCGCCATGAACAGGGTGGTGAGCCGGTTGCTGACCTACGTGTGCGTTATGCGTCACTCCAGGGC ACGCGTGTTCCTGAAGATTTGGTGCCGGATATGATTGACGAATTCCCTGCCTTGTTTGTCGCTGCAGCGGCAGCCGAAGG TCAAACGGTAGTGAGTGGTGCGGCTGAACTACGCGTTAAAGAATCGGACCGGTTGGCTGCGATGGTGACAGGCTTGCGCG TGCTTGGCGTTCAGGTGGATGAGACCGCCGACGGGGCAACGATTCATGGAGGGCCCATCGGTCATGGCACCATCAACAGC CATGGCGATCATCGCATCGCCATGGCGTTTTCAATTGCAGGGCAGCTTTCCGTCAGTACAGTACGTATTGAAGATGTCGC CAATGTTGCGACTTCTTTTCCAGACTATGAGACGTTAGCGCGCAGCGCTGGTTTCGGTCTTGAGGTGTACTGCGATCCAG CATGA
Upstream 100 bases:
>100_bases GCGGTGAAGGTCAAGATCCTCGGAGCCTATCCAATTGCCCTTCTATGATGCTTGAGTATTTCTGTCCAGGAGCGACACGC ATTACCGCAGCCTCGGCGGT
Downstream 100 bases:
>100_bases ATGAACGCCATTAATATCTGTACTGCCTTGTAAGCCATGCGATGGTTGTTCTCACTTAAAGAAGCCCAGCAGTTCTTTCG TGTTTCTTTCACTTGTTCTT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MYCRRSQLKKPSMSHRTHYYWIAHQGTPLHGVLSIPGDKSISHRAVMFAALADGTSRIDGFLEAEDTRSTAAILARLGVR IETPSFTQRIVHGVGVDGLQASDIALDCGNAGTGMRLLAGLLVAQPFDSVLVGDASLSKRPMRRVTDPLSQMGARIDTSD DGTPPLRIYGGQLLRGIDFISPVASAQIKSAVLLAGLYARNETVVREPHPTRDYTERMLTAFGVDIDVSTGCVRLRGGQR LCATNITIPADFSSAAFYLVAASVIPGSDITLRAVGLNPRRIGLLTVLRLMGADIVESNRHEQGGEPVADLRVRYASLQG TRVPEDLVPDMIDEFPALFVAAAAAEGQTVVSGAAELRVKESDRLAAMVTGLRVLGVQVDETADGATIHGGPIGHGTINS HGDHRIAMAFSIAGQLSVSTVRIEDVANVATSFPDYETLARSAGFGLEVYCDPA
Sequences:
>Translated_454_residues MYCRRSQLKKPSMSHRTHYYWIAHQGTPLHGVLSIPGDKSISHRAVMFAALADGTSRIDGFLEAEDTRSTAAILARLGVR IETPSFTQRIVHGVGVDGLQASDIALDCGNAGTGMRLLAGLLVAQPFDSVLVGDASLSKRPMRRVTDPLSQMGARIDTSD DGTPPLRIYGGQLLRGIDFISPVASAQIKSAVLLAGLYARNETVVREPHPTRDYTERMLTAFGVDIDVSTGCVRLRGGQR LCATNITIPADFSSAAFYLVAASVIPGSDITLRAVGLNPRRIGLLTVLRLMGADIVESNRHEQGGEPVADLRVRYASLQG TRVPEDLVPDMIDEFPALFVAAAAAEGQTVVSGAAELRVKESDRLAAMVTGLRVLGVQVDETADGATIHGGPIGHGTINS HGDHRIAMAFSIAGQLSVSTVRIEDVANVATSFPDYETLARSAGFGLEVYCDPA >Mature_454_residues MYCRRSQLKKPSMSHRTHYYWIAHQGTPLHGVLSIPGDKSISHRAVMFAALADGTSRIDGFLEAEDTRSTAAILARLGVR IETPSFTQRIVHGVGVDGLQASDIALDCGNAGTGMRLLAGLLVAQPFDSVLVGDASLSKRPMRRVTDPLSQMGARIDTSD DGTPPLRIYGGQLLRGIDFISPVASAQIKSAVLLAGLYARNETVVREPHPTRDYTERMLTAFGVDIDVSTGCVRLRGGQR LCATNITIPADFSSAAFYLVAASVIPGSDITLRAVGLNPRRIGLLTVLRLMGADIVESNRHEQGGEPVADLRVRYASLQG TRVPEDLVPDMIDEFPALFVAAAAAEGQTVVSGAAELRVKESDRLAAMVTGLRVLGVQVDETADGATIHGGPIGHGTINS HGDHRIAMAFSIAGQLSVSTVRIEDVANVATSFPDYETLARSAGFGLEVYCDPA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=426, Percent_Identity=32.3943661971831, Blast_Score=143, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320332, Length=438, Percent_Identity=28.5388127853881, Blast_Score=131, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 48323; Mature: 48323
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCRRSQLKKPSMSHRTHYYWIAHQGTPLHGVLSIPGDKSISHRAVMFAALADGTSRIDG CCCCCHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHEEEEEEHHCCHHHHCC FLEAEDTRSTAAILARLGVRIETPSFTQRIVHGVGVDGLQASDIALDCGNAGTGMRLLAG EEECCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH LLVAQPFDSVLVGDASLSKRPMRRVTDPLSQMGARIDTSDDGTPPLRIYGGQLLRGIDFI HHHHCCCCCEEECCCHHCCCHHHHHHHHHHHHCCEECCCCCCCCCEEEECHHHHHHHHHH SPVASAQIKSAVLLAGLYARNETVVREPHPTRDYTERMLTAFGVDIDVSTGCVRLRGGQR HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCEEECCCCEEEECCCCE LCATNITIPADFSSAAFYLVAASVIPGSDITLRAVGLNPRRIGLLTVLRLMGADIVESNR EEEECCEECCCCCCCEEEEEEEHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCC HEQGGEPVADLRVRYASLQGTRVPEDLVPDMIDEFPALFVAAAAAEGQTVVSGAAELRVK CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEC ESDRLAAMVTGLRVLGVQVDETADGATIHGGPIGHGTINSHGDHRIAMAFSIAGQLSVST CCCHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE VRIEDVANVATSFPDYETLARSAGFGLEVYCDPA EEHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MYCRRSQLKKPSMSHRTHYYWIAHQGTPLHGVLSIPGDKSISHRAVMFAALADGTSRIDG CCCCCHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHEEEEEEHHCCHHHHCC FLEAEDTRSTAAILARLGVRIETPSFTQRIVHGVGVDGLQASDIALDCGNAGTGMRLLAG EEECCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH LLVAQPFDSVLVGDASLSKRPMRRVTDPLSQMGARIDTSDDGTPPLRIYGGQLLRGIDFI HHHHCCCCCEEECCCHHCCCHHHHHHHHHHHHCCEECCCCCCCCCEEEECHHHHHHHHHH SPVASAQIKSAVLLAGLYARNETVVREPHPTRDYTERMLTAFGVDIDVSTGCVRLRGGQR HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCEEECCCCEEEECCCCE LCATNITIPADFSSAAFYLVAASVIPGSDITLRAVGLNPRRIGLLTVLRLMGADIVESNR EEEECCEECCCCCCCEEEEEEEHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCC HEQGGEPVADLRVRYASLQGTRVPEDLVPDMIDEFPALFVAAAAAEGQTVVSGAAELRVK CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEC ESDRLAAMVTGLRVLGVQVDETADGATIHGGPIGHGTINSHGDHRIAMAFSIAGQLSVST CCCHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE VRIEDVANVATSFPDYETLARSAGFGLEVYCDPA EEHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]