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The map label for this gene is traN

Identifier: 28198880

GI number: 28198880

Start: 1177648

End: 1178493

Strand: Reverse

Name: traN

Synonym: PD0981

Alternate gene names: NA

Gene position: 1178493-1177648 (Counterclockwise)

Preceding gene: 28198883

Following gene: 28198879

Centisome position: 46.77

GC content: 60.87

Gene sequence:

>846_bases
ATGTTGACATTACCGGAGCTACTGCGCTTGCAGGGACGCCGGGTCAAGAAGCGGCAGTTACGCCCGCCGCGACCCAGCCG
CCACGCTGAGGCGATGTATAGGAACGAACTGCTGGCCTTGGTGCGGGTGCTGCACCAAGCAGTGCGGGAGGAGGTGCTGC
CGGTGCTCAACGCATCGCAGCCCCACATGACACGTGATGCGCCTGACGGCAACGCCCCACAAGGCTATCTGGCCTCCCAG
TTCATGCAGGCCATTGAAGCGGCCTTGCTGCGGGCGGCGTTGCGCTGTGGTGGCTTGCCTCAATGGGCCGAGCGGATGGC
CGCCCAGCAGGTGCAGCGTGTGGACCGTCAGGTCGTACAGACGATTGGCAGCGCCGTGCGTACCGCCTTCGGCATCGACA
TCACGTCATTGATGCTGGCCCAGCAGGTGCGCACGCAGATACACGCGGCCCGTGCCGTCAATGTCCAGTTGATTACCTCC
ATTCAGCGACAGTATTTCGACAAGATCGGTACGGCCGTGTTGCAAGGCGTCATGCAGGGCAGACGCGCCAAAGATGTTGC
CAAGGAGATTGAACAAATCACCGATGCCACGGCATCACGGGCCACATTCATTGCACGGGATCAGACATCAAAAATGAATG
CCGCATTCAATGAAATCCGGCAAGTGGGGTTGGGGATTGAAAGCTACACCTGGCAGACCTCAGGAGATGAACGGGTGCGT
GAGGATCATGCCGCCCATGATGGCACCGTCTTTCGATGGAGCGATCCCCCCGCGACGGGGCATCCGGGACAGGACTACAA
CTGCCGCTGTGTGGCGATTCCGAACGTGACGCTGGAAGGCCCTTGA

Upstream 100 bases:

>100_bases
CCTCTGAATTCAATCGGTTTGGCCCCTTCCATGCGCCATGATACAAAACTTTGTATGAGCGCAAGGATATCTTTGTCGGC
CCACGGAATGTAGGTTCCAG

Downstream 100 bases:

>100_bases
TGATCACCCTAGATGTCCAACTGACCCAACGTCGCAAGACGCCGGAAGGGTATCTGATCGTACCTGCCCGATTTGCGCGC
ACCGGCATACAGCACTATGC

Product: plasmid-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLTLPELLRLQGRRVKKRQLRPPRPSRHAEAMYRNELLALVRVLHQAVREEVLPVLNASQPHMTRDAPDGNAPQGYLASQ
FMQAIEAALLRAALRCGGLPQWAERMAAQQVQRVDRQVVQTIGSAVRTAFGIDITSLMLAQQVRTQIHAARAVNVQLITS
IQRQYFDKIGTAVLQGVMQGRRAKDVAKEIEQITDATASRATFIARDQTSKMNAAFNEIRQVGLGIESYTWQTSGDERVR
EDHAAHDGTVFRWSDPPATGHPGQDYNCRCVAIPNVTLEGP

Sequences:

>Translated_281_residues
MLTLPELLRLQGRRVKKRQLRPPRPSRHAEAMYRNELLALVRVLHQAVREEVLPVLNASQPHMTRDAPDGNAPQGYLASQ
FMQAIEAALLRAALRCGGLPQWAERMAAQQVQRVDRQVVQTIGSAVRTAFGIDITSLMLAQQVRTQIHAARAVNVQLITS
IQRQYFDKIGTAVLQGVMQGRRAKDVAKEIEQITDATASRATFIARDQTSKMNAAFNEIRQVGLGIESYTWQTSGDERVR
EDHAAHDGTVFRWSDPPATGHPGQDYNCRCVAIPNVTLEGP
>Mature_281_residues
MLTLPELLRLQGRRVKKRQLRPPRPSRHAEAMYRNELLALVRVLHQAVREEVLPVLNASQPHMTRDAPDGNAPQGYLASQ
FMQAIEAALLRAALRCGGLPQWAERMAAQQVQRVDRQVVQTIGSAVRTAFGIDITSLMLAQQVRTQIHAARAVNVQLITS
IQRQYFDKIGTAVLQGVMQGRRAKDVAKEIEQITDATASRATFIARDQTSKMNAAFNEIRQVGLGIESYTWQTSGDERVR
EDHAAHDGTVFRWSDPPATGHPGQDYNCRCVAIPNVTLEGP

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli plasmid IncP-alpha RP4 protein traN [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006528 [H]

Pfam domain/function: PF04233 Phage_Mu_F [H]

EC number: NA

Molecular weight: Translated: 31303; Mature: 31303

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLPELLRLQGRRVKKRQLRPPRPSRHAEAMYRNELLALVRVLHQAVREEVLPVLNASQ
CCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHMTRDAPDGNAPQGYLASQFMQAIEAALLRAALRCGGLPQWAERMAAQQVQRVDRQVVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TIGSAVRTAFGIDITSLMLAQQVRTQIHAARAVNVQLITSIQRQYFDKIGTAVLQGVMQG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRAKDVAKEIEQITDATASRATFIARDQTSKMNAAFNEIRQVGLGIESYTWQTSGDERVR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCEECCCCHHHHH
EDHAAHDGTVFRWSDPPATGHPGQDYNCRCVAIPNVTLEGP
HHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEECCC
>Mature Secondary Structure
MLTLPELLRLQGRRVKKRQLRPPRPSRHAEAMYRNELLALVRVLHQAVREEVLPVLNASQ
CCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PHMTRDAPDGNAPQGYLASQFMQAIEAALLRAALRCGGLPQWAERMAAQQVQRVDRQVVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TIGSAVRTAFGIDITSLMLAQQVRTQIHAARAVNVQLITSIQRQYFDKIGTAVLQGVMQG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRAKDVAKEIEQITDATASRATFIARDQTSKMNAAFNEIRQVGLGIESYTWQTSGDERVR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCEECCCCHHHHH
EDHAAHDGTVFRWSDPPATGHPGQDYNCRCVAIPNVTLEGP
HHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]