| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198875
Identifier: 28198875
GI number: 28198875
Start: 1174167
End: 1174538
Strand: Reverse
Name: 28198875
Synonym: PD0976
Alternate gene names: NA
Gene position: 1174538-1174167 (Counterclockwise)
Preceding gene: 28198876
Following gene: 28198874
Centisome position: 46.61
GC content: 66.13
Gene sequence:
>372_bases ATGTCCGAGTCACTGACGCTTCACACGTTCCTGGCACGCTATCCGGAGTTTGCCACCCAGCCCCCGGAACGGGTGGCTCA GGCCCTGGAAGACGCCCATCCCTGGGTGGATGCGTCCCGATGGGGAGCGGCGTATGCGCAAGGAATCGCGAGCCTGGCGG CCCATTTTGTTTGGTCCACCCCAGGGCTGGGAGCCGACAGCGCCGCCGCTAGAGGCGTGGTGGTGTCCGAGCGCGCCGGT GATCTGCACATCAGCTACGCGGCGCTGCCCTCTGACAGTGCCAGTGACGCTTGGCTCGCCACCTCGGTGTATGGACAACG TTACCTGACGCTGCGTCGGATGATCGGCCTGGGGGCCTTGGTCGCCCCATGA
Upstream 100 bases:
>100_bases AAGGGCAGGTTTCTGGTGAAGGGAGCGCGGCTGTCCTTCCGGGGACCGGCAGCCATGACAGCACGCCGGTCAAATCTGGC AAACCCGGAAGGAAGGGATG
Downstream 100 bases:
>100_bases GTGCCGTCAAGATCATTCGGCCCGCCGATCCCAACACGTGGAAGGCCCTGGCGCAGCGGCTGCACGCGATGGCGCAGCGC TGTGTCGTGGTGGGCATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSESLTLHTFLARYPEFATQPPERVAQALEDAHPWVDASRWGAAYAQGIASLAAHFVWSTPGLGADSAAARGVVVSERAG DLHISYAALPSDSASDAWLATSVYGQRYLTLRRMIGLGALVAP
Sequences:
>Translated_123_residues MSESLTLHTFLARYPEFATQPPERVAQALEDAHPWVDASRWGAAYAQGIASLAAHFVWSTPGLGADSAAARGVVVSERAG DLHISYAALPSDSASDAWLATSVYGQRYLTLRRMIGLGALVAP >Mature_122_residues SESLTLHTFLARYPEFATQPPERVAQALEDAHPWVDASRWGAAYAQGIASLAAHFVWSTPGLGADSAAARGVVVSERAGD LHISYAALPSDSASDAWLATSVYGQRYLTLRRMIGLGALVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13084; Mature: 12953
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLTLHTFLARYPEFATQPPERVAQALEDAHPWVDASRWGAAYAQGIASLAAHFVWST CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PGLGADSAAARGVVVSERAGDLHISYAALPSDSASDAWLATSVYGQRYLTLRRMIGLGAL CCCCCCCHHHCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH VAP CCC >Mature Secondary Structure SESLTLHTFLARYPEFATQPPERVAQALEDAHPWVDASRWGAAYAQGIASLAAHFVWST CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PGLGADSAAARGVVVSERAGDLHISYAALPSDSASDAWLATSVYGQRYLTLRRMIGLGAL CCCCCCCHHHCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH VAP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA