Click here to switch to the map view.

The map label for this gene is tonB

Identifier: 28198748

GI number: 28198748

Start: 1045496

End: 1046395

Strand: Reverse

Name: tonB

Synonym: PD0843

Alternate gene names: NA

Gene position: 1046395-1045496 (Counterclockwise)

Preceding gene: 28198749

Following gene: 28198747

Centisome position: 41.53

GC content: 53.67

Gene sequence:

>900_bases
ATGCAATTGAAACTGGAGGCTGATATGGATGCGGTCAATACAGCCCAAATCCGGGAACGTCAACGTCTGAACACAACACT
GGTTCTGTCGATTCTCATACACCTTGCGCTGATTCTAGGAGTAGGCTTCGCAGTCACCGACAAAGCTCCCTTAGTCCCCA
CCCTGGATGTCATCTTTAGCCAAACAAGTACCCCACTGACGCCCAAGCAAGCTGATTTTCTAGCTCAAGCTAACCAGCAA
GGCGGCGGAGATCAAGATAAAGCGCAACGCCCGCGCGACAGCCAACCTGGCGTGATACCCCAAGAGCAAGTGGGAATCGC
CCCACAAACACAACGCGCAACACAAGCACGCGCACCAGAACCAATCCAACCGAACGTCATCACCAGCCGTTATGGCAAAC
AACCGCTTCCAGTACAGCAAACACGTCTTCAAGATCGACATTCACAGCCTAACCCCACCGATGCAAAACGTGAACAACGG
AATGCAGAGATGGCACGCTTAGCTGCTGAAGTAAACCTACGCTCAGAAGAGTATGCCAAGCGCCCAACTCGCAAATTTAT
CTCAGCCAGCACACGCGAATACGCTTATGCAAACTACCTGCGTGCATGGGTTGATCGTGCCGAACGAGTCGGCAATCTGA
ACTACCCGGACGAGGCACGGCGACGTCGGCTCAGCGGCCGTGTGATTATCACTGTGGGCATACGCCGTGATGGCAGCGTA
GATAGCAGCAGAGTACTGATTTCTAGCGGCTCCCCACTGCTGGATGCGGCCGCATTACGCATCGTCCAACTAGCACAACC
ATTCCCGCCACTTCCCAAGACACAAGACAATGTCGACATCCTACATGTGACCCGCACTTGGCTATTCCTACCTGCCGGCA
GCTTGCATGACAATCACTGA

Upstream 100 bases:

>100_bases
GTGATCGGCGACTACTTGACTGAGATAAACGTCACAAGCCCCACCTGCCTACGCGAATTAGACGCACAGTGCGGCCTGAA
CATCGCTGGACAACTGTTCG

Downstream 100 bases:

>100_bases
CATGACACGCATCCATGCGCATTTATTTATCATAAATTTATTACGATGCTTGACCATGCCAATGCCACTTTTATAAAACC
TGTAACCTTTGCAGCCTCTG

Product: TonB protein

Products: NA

Alternate protein names: NB Protein; NB Family C-Terminal Domain Protein; NB-Like Protein; NB C-Terminal; NB Domain-Containing Protein; NB-Like; Periplasmic Protein nB Links Inner And Outer Membranes; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; NB-Dependent Receptor; NB Family C-Terminal Domain-Containing; Nb Protein

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQLKLEADMDAVNTAQIRERQRLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQ
GGGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQTRLQDRHSQPNPTDAKREQR
NAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSV
DSSRVLISSGSPLLDAAALRIVQLAQPFPPLPKTQDNVDILHVTRTWLFLPAGSLHDNH

Sequences:

>Translated_299_residues
MQLKLEADMDAVNTAQIRERQRLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQ
GGGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQTRLQDRHSQPNPTDAKREQR
NAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSV
DSSRVLISSGSPLLDAAALRIVQLAQPFPPLPKTQDNVDILHVTRTWLFLPAGSLHDNH
>Mature_299_residues
MQLKLEADMDAVNTAQIRERQRLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQ
GGGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQTRLQDRHSQPNPTDAKREQR
NAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSV
DSSRVLISSGSPLLDAAALRIVQLAQPFPPLPKTQDNVDILHVTRTWLFLPAGSLHDNH

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33318; Mature: 33318

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKLEADMDAVNTAQIRERQRLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFS
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHC
QTSTPLTPKQADFLAQANQQGGGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPE
CCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCC
PIQPNVITSRYGKQPLPVQQTRLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAK
CCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RPTRKFISASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
DSSRVLISSGSPLLDAAALRIVQLAQPFPPLPKTQDNVDILHVTRTWLFLPAGSLHDNH
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MQLKLEADMDAVNTAQIRERQRLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFS
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHC
QTSTPLTPKQADFLAQANQQGGGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPE
CCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCC
PIQPNVITSRYGKQPLPVQQTRLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAK
CCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RPTRKFISASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
DSSRVLISSGSPLLDAAALRIVQLAQPFPPLPKTQDNVDILHVTRTWLFLPAGSLHDNH
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA