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The map label for this gene is ychA [C]

Identifier: 28198615

GI number: 28198615

Start: 869843

End: 870730

Strand: Reverse

Name: ychA [C]

Synonym: PD0709

Alternate gene names: 28198615

Gene position: 870730-869843 (Counterclockwise)

Preceding gene: 28198616

Following gene: 28198613

Centisome position: 34.56

GC content: 53.04

Gene sequence:

>888_bases
TTGGGCTTGAATAAAGAGACACTTGGCACCACCCTGTGTTTCATGGTCGAACAACTGCTACTACCCCTCTGGAACAACCT
CGCCACTGTCGACGATGAAACGCTGCCATTGATGTCGACAGCGTTACTGATCGCTCGTGACGAATATCCAGACCTGGACG
CTAACCTCTACGACACGCTGGTACAAAGCTATGTCGAATACCTCCGCTCAGAAGTGGAAGAGATTTCTCTGTGGCCACTG
AAGATGGCCGCAGTAAACCGTTACTTGTTCCAAAAATTAGGATATTCAGGAAACCACGACGAGTATTACGATCCACGCAA
CAGCTACCTCAATCAGGTATTTGAGCGCCGTCTTGGCAATCCAATCTCCCTGGCAGTCATACAAATAGAGGTAGCACGAC
GCCTTGGTATTCCTCTAGACGGTGTATCATTCCCTGGGCATTTCTTGGTCCGGCTGCCTGTCGACGACGGCATACTCGTC
ATGGATCCATTCAACGGCGGCCGACCATTAGACGCAGAAGAGTTACGGGAGCGCGCCCGCCCACATCTAGGTGGTGAAGC
GCCAGATGATCGCGCATTAGCTCAAATCCTCAATCCCGCACCACACCGCACAATCCTCGTTCGTATCCTACGCAACCTAC
ACAGTGTGTACGCTAACACTGACCGCTGGGATCGCGCAGCACGCTGCGCTGATCGCATCCTCAAACTGGTGCCGAACCAA
CCTGAAGCACTCCGCGACCGCGGCTTAGCATATCTGCAACTTGGACATCGCAGCGGTGCACTGAACGACTTGAAGCGCTA
CCTGCAGCTCTACCCATCCACACACAACGTCGACATGGTGCGTGGCCATCTAGTAGATCTAAGCAATGAACGCATCCAAA
CGCATTGA

Upstream 100 bases:

>100_bases
GAAAGATGGTACCCAACTGGTATTCGGACCAGGCATTCCCAAACTCTGATTAATCGGTTTTGCCATTGGCCATAGATCGG
CAGGCCCCTTTCAGAAAACG

Downstream 100 bases:

>100_bases
AACTGATACGTTAAACGACTATGCGACTATGCGTATGGTTAAGATAAGTAATCCTGACTTTCAACAATAAAAACTCCAAA
CGCACAGAAACGTGCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGLNKETLGTTLCFMVEQLLLPLWNNLATVDDETLPLMSTALLIARDEYPDLDANLYDTLVQSYVEYLRSEVEEISLWPL
KMAAVNRYLFQKLGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAVIQIEVARRLGIPLDGVSFPGHFLVRLPVDDGILV
MDPFNGGRPLDAEELRERARPHLGGEAPDDRALAQILNPAPHRTILVRILRNLHSVYANTDRWDRAARCADRILKLVPNQ
PEALRDRGLAYLQLGHRSGALNDLKRYLQLYPSTHNVDMVRGHLVDLSNERIQTH

Sequences:

>Translated_295_residues
MGLNKETLGTTLCFMVEQLLLPLWNNLATVDDETLPLMSTALLIARDEYPDLDANLYDTLVQSYVEYLRSEVEEISLWPL
KMAAVNRYLFQKLGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAVIQIEVARRLGIPLDGVSFPGHFLVRLPVDDGILV
MDPFNGGRPLDAEELRERARPHLGGEAPDDRALAQILNPAPHRTILVRILRNLHSVYANTDRWDRAARCADRILKLVPNQ
PEALRDRGLAYLQLGHRSGALNDLKRYLQLYPSTHNVDMVRGHLVDLSNERIQTH
>Mature_294_residues
GLNKETLGTTLCFMVEQLLLPLWNNLATVDDETLPLMSTALLIARDEYPDLDANLYDTLVQSYVEYLRSEVEEISLWPLK
MAAVNRYLFQKLGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAVIQIEVARRLGIPLDGVSFPGHFLVRLPVDDGILVM
DPFNGGRPLDAEELRERARPHLGGEAPDDRALAQILNPAPHRTILVRILRNLHSVYANTDRWDRAARCADRILKLVPNQP
EALRDRGLAYLQLGHRSGALNDLKRYLQLYPSTHNVDMVRGHLVDLSNERIQTH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=238, Percent_Identity=29.8319327731092, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI16306502, Length=199, Percent_Identity=30.6532663316583, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1787465, Length=280, Percent_Identity=25, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33656; Mature: 33525

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLNKETLGTTLCFMVEQLLLPLWNNLATVDDETLPLMSTALLIARDEYPDLDANLYDTL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
VQSYVEYLRSEVEEISLWPLKMAAVNRYLFQKLGYSGNHDEYYDPRNSYLNQVFERRLGN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PISLAVIQIEVARRLGIPLDGVSFPGHFLVRLPVDDGILVMDPFNGGRPLDAEELRERAR
CEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCC
PHLGGEAPDDRALAQILNPAPHRTILVRILRNLHSVYANTDRWDRAARCADRILKLVPNQ
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PEALRDRGLAYLQLGHRSGALNDLKRYLQLYPSTHNVDMVRGHLVDLSNERIQTH
CHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GLNKETLGTTLCFMVEQLLLPLWNNLATVDDETLPLMSTALLIARDEYPDLDANLYDTL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
VQSYVEYLRSEVEEISLWPLKMAAVNRYLFQKLGYSGNHDEYYDPRNSYLNQVFERRLGN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PISLAVIQIEVARRLGIPLDGVSFPGHFLVRLPVDDGILVMDPFNGGRPLDAEELRERAR
CEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCC
PHLGGEAPDDRALAQILNPAPHRTILVRILRNLHSVYANTDRWDRAARCADRILKLVPNQ
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PEALRDRGLAYLQLGHRSGALNDLKRYLQLYPSTHNVDMVRGHLVDLSNERIQTH
CHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]