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The map label for this gene is cybB [H]

Identifier: 28198484

GI number: 28198484

Start: 703271

End: 703837

Strand: Reverse

Name: cybB [H]

Synonym: PD0574

Alternate gene names: 28198484

Gene position: 703837-703271 (Counterclockwise)

Preceding gene: 28198485

Following gene: 28198483

Centisome position: 27.93

GC content: 54.32

Gene sequence:

>567_bases
ATGACGCTGAAGGGCACTGCTGAACGATGGGGCTGGATGAGCCAAGCGCTGCACTGGCTGATTGCGGTGCTGATCCTAGG
CTTAGGGATTGGCGGCCTCATTATGGGCAAACTGCCTAAAACTCCGAATTATTTTTGGGTGTATACCGCACACAAATCAA
TAGGCATCAGCGTGCTGGCACTGGCGGTATTACGTCTGTTTTGGCGTCTGTATGCCGGCGCCCCCAAACCAATCGCGGGC
ACGCCTGTCTGGCAGGAGCGCGTTGCCAATGCCACTCATATCATGCTCTACGTACTTATTTTCACTATCCCACTGGCCGG
TTGGCTGTACGATTCAGCCCGTGGTCTGCGCACGTTCTACTGGTTTGGTTTGTTTGAAATGCCCGCGTTGGTGTCGCCAA
ACGAAACGATACGTGGAGTCGCGCTGGAGATCCATAAACTCAGCTTCTGGGCACTGATCGGCTTAGTCGTCTTGCATGCC
GGCGCTGCTTTCCACCATCATCTCATTCAACGGGACGCCACCCTGGCAAGAATGCTGCCACGCAACTGGTTCTCGTCAAA
ATCCTAA

Upstream 100 bases:

>100_bases
GGACACGACAACATCAAGCAATACAAAGGAATCAGATGCAACACTACACAAAACAGATACAAGCAAAAAAACAAATGAGC
TACTGTAAGGGGAGCTGGTC

Downstream 100 bases:

>100_bases
GGAGAAAGGAGTGATCTATGTTCAAAGGGTCTTTTCTTACCGTGCTAACAGCCGCCACCCTGGTGATTGGCTGCTACGTC
GTTCCCCCGGCTTGCGCAAC

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTLKGTAERWGWMSQALHWLIAVLILGLGIGGLIMGKLPKTPNYFWVYTAHKSIGISVLALAVLRLFWRLYAGAPKPIAG
TPVWQERVANATHIMLYVLIFTIPLAGWLYDSARGLRTFYWFGLFEMPALVSPNETIRGVALEIHKLSFWALIGLVVLHA
GAAFHHHLIQRDATLARMLPRNWFSSKS

Sequences:

>Translated_188_residues
MTLKGTAERWGWMSQALHWLIAVLILGLGIGGLIMGKLPKTPNYFWVYTAHKSIGISVLALAVLRLFWRLYAGAPKPIAG
TPVWQERVANATHIMLYVLIFTIPLAGWLYDSARGLRTFYWFGLFEMPALVSPNETIRGVALEIHKLSFWALIGLVVLHA
GAAFHHHLIQRDATLARMLPRNWFSSKS
>Mature_187_residues
TLKGTAERWGWMSQALHWLIAVLILGLGIGGLIMGKLPKTPNYFWVYTAHKSIGISVLALAVLRLFWRLYAGAPKPIAGT
PVWQERVANATHIMLYVLIFTIPLAGWLYDSARGLRTFYWFGLFEMPALVSPNETIRGVALEIHKLSFWALIGLVVLHAG
AAFHHHLIQRDATLARMLPRNWFSSKS

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=185, Percent_Identity=34.0540540540541, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI87082013, Length=177, Percent_Identity=32.7683615819209, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 21161; Mature: 21030

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKGTAERWGWMSQALHWLIAVLILGLGIGGLIMGKLPKTPNYFWVYTAHKSIGISVLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCHHHHHHHH
LAVLRLFWRLYAGAPKPIAGTPVWQERVANATHIMLYVLIFTIPLAGWLYDSARGLRTFY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFGLFEMPALVSPNETIRGVALEIHKLSFWALIGLVVLHAGAAFHHHLIQRDATLARMLP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
RNWFSSKS
HHHCCCCC
>Mature Secondary Structure 
TLKGTAERWGWMSQALHWLIAVLILGLGIGGLIMGKLPKTPNYFWVYTAHKSIGISVLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCHHHHHHHH
LAVLRLFWRLYAGAPKPIAGTPVWQERVANATHIMLYVLIFTIPLAGWLYDSARGLRTFY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFGLFEMPALVSPNETIRGVALEIHKLSFWALIGLVVLHAGAAFHHHLIQRDATLARMLP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
RNWFSSKS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]