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The map label for this gene is yrbE [C]

Identifier: 28198464

GI number: 28198464

Start: 678468

End: 679586

Strand: Reverse

Name: yrbE [C]

Synonym: PD0554

Alternate gene names: 28198464

Gene position: 679586-678468 (Counterclockwise)

Preceding gene: 28198475

Following gene: 28198463

Centisome position: 26.97

GC content: 52.1

Gene sequence:

>1119_bases
ATGCCGAAAAAGACCGTTACTGCACCGCACATTGAACAAGACGCCCAAGACCGTGGCCAGATACACCTGAGCGGCAGCTG
GGTGTTAGCTAACTTATTAACGGCATCCGAATTACTTCAGTCATATAGCAACTCCATCCAGCACATCAACGCACGCAATA
TCGACCAACTCGATTCGGCCGGCGCATTACAGCTGCTGCGTTTCACCACACGTACAGGACTGAAAAACGAAGCAATCGAA
TTTCGGGAAGAACACCGCCCCTTGATCTCCACAATTGAGATTCTCGACGATGAGCATCCCAAACCTGAACGTGACTACGG
TTTTCTTGCAGCACTGGAACGCCTAGGCATCGCGGTTGTCAAAACCCGCCGCAATATTATCGACGTATGCAGCTTCCTCG
GCGAGAACTTAGTGAAGATAGCCCAACTGGCTCGCGAACCACGGCGGTTCCGCATCACCTCAACCGTGCACCACATGGAG
CAAGTCGGTTTGGATGCGGTGCCTCTGGTGGTGGTGCTGTCGTATTTGGTAGGCGCTGTAATTGCATTCCTAGGTTCGAC
CATCTTGCGCAACTTTGGCGCAGAAATCTTCGTCGTCGAATTAGTCAACATTGCCTTCCTGCGTGAGTTCGCAGTGCTGT
TGACCGCAATTGTCCTGGCCGGTCGTACCGCCAGCGCGTTCACAGCACAAATCGGTGCGATGAAGTCGCGCGAAGAAATC
GACGCAATCCAAACTTTAGGCCTAGACCCGATCGACCTGCTAGTCATCCCACGTCTTATCGCACTGCTAGTCATGCTCCC
ACTATTGACCTTCATCGCAATGATCGCCGGCTTAGCTGGAGGAATTACGGTTGGCGCATTTGACCTAGGCATCCCTCCGC
AAATGTACTTGTCACGCATGCACGAAACCATGCAATTGCGGCACTTCATAATAGGGATGTCCAAAGCACCACTGTTTGCA
CTGATTATTGGATTGATCGGCTGTCTGGAGGGACTCAAAGTCACCGGCACCGCACAATCCGTCGGCAAACATACCACCTC
CAGTGTTGTACAAACGATCTCGCTAGTCATCATCATTGATGCCTTAGCAGCACTGTGGTTCATGCGTATGGGTTGGTGA

Upstream 100 bases:

>100_bases
AAAAAGGCACGAATAGCGAAGAGAGTCAGTGTATGTCGCCTCTGACGTGAAGATCGACCTTCGTACTTCACGCGGAACCG
GTTATGCTTACACGCTTATT

Downstream 100 bases:

>100_bases
AGCTGATGAGCAAAATAACAACGCATCCCATCGCCGCAGAACATAAGGAAGCAAACTTGGCAATCCGCGTACGTGGCTTA
ATCAACCACTTCGGGACGCA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MPKKTVTAPHIEQDAQDRGQIHLSGSWVLANLLTASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTRTGLKNEAIE
FREEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAVVKTRRNIIDVCSFLGENLVKIAQLAREPRRFRITSTVHHME
QVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEI
DAIQTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFA
LIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMGW

Sequences:

>Translated_372_residues
MPKKTVTAPHIEQDAQDRGQIHLSGSWVLANLLTASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTRTGLKNEAIE
FREEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAVVKTRRNIIDVCSFLGENLVKIAQLAREPRRFRITSTVHHME
QVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEI
DAIQTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFA
LIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMGW
>Mature_371_residues
PKKTVTAPHIEQDAQDRGQIHLSGSWVLANLLTASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTRTGLKNEAIEF
REEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAVVKTRRNIIDVCSFLGENLVKIAQLAREPRRFRITSTVHHMEQ
VGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEID
AIQTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFAL
IIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMGW

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=262, Percent_Identity=29.7709923664122, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40770; Mature: 40639

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKTVTAPHIEQDAQDRGQIHLSGSWVLANLLTASELLQSYSNSIQHINARNIDQLDSA
CCCCCCCCCCCHHCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
GALQLLRFTTRTGLKNEAIEFREEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAVV
HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KTRRNIIDVCSFLGENLVKIAQLAREPRRFRITSTVHHMEQVGLDAVPLVVVLSYLVGAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IAFLGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
DAIQTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
HETMQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
ALAALWFMRMGW
HHHHHHHHHHCC
>Mature Secondary Structure 
PKKTVTAPHIEQDAQDRGQIHLSGSWVLANLLTASELLQSYSNSIQHINARNIDQLDSA
CCCCCCCCCCHHCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
GALQLLRFTTRTGLKNEAIEFREEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAVV
HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KTRRNIIDVCSFLGENLVKIAQLAREPRRFRITSTVHHMEQVGLDAVPLVVVLSYLVGAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IAFLGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
DAIQTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRM
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
HETMQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
ALAALWFMRMGW
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]