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The map label for this gene is yfcN [C]

Identifier: 28198457

GI number: 28198457

Start: 671331

End: 671873

Strand: Reverse

Name: yfcN [C]

Synonym: PD0547

Alternate gene names: 28198457

Gene position: 671873-671331 (Counterclockwise)

Preceding gene: 28198458

Following gene: 28198449

Centisome position: 26.66

GC content: 54.33

Gene sequence:

>543_bases
ATGACACAGCACAATGACAATGATGATGATGCCGCACTGTTCCGTGCTGCGATCGGTCCTGTACGGCCACTGCGCCCAAG
CGAGACGGCCATCACCATCAAACCTCGCTCACGGCCCCGCAGGTGCATCATCAAACACCACGAAGACGAGGCGAAAAGCG
AATTTGCACAGTTACTACGCGAATCAGCGCCACTGGAAGCTGGCGACACTATCAGCTACCGCAGTAAAGCCCTGCCTTCG
CGTCTGTTCCAGAGACTCAAGCGAGGACAATTCTCGGTACAGGACGAACTGGACCTGCATGGAGCCACTGTCGTACAAGC
TGAAACACTACTGCGCCAATTTCTACTCGAAGCACATACGTACGAATATGGCTGCGTCCGCATCATCCACGGTAAAGGAC
TGCAATCCAACGGCGGCACCCCAGTACTGAAAAATCTGGTGAATCAATTGCTGCGCTTACGCAAAGATGTGCTTGCGTTC
CATTCTTCACCACCCGCTCAAGGCGGCACCGGCGCAGTATTGGTGCTATTAACGCACCGCTAA

Upstream 100 bases:

>100_bases
CCATTTACCCTCATCCATGCACTGCTACTCTCCAACAGGAATAATCCACAAGGGACATGTGGGCAACTCCTTGGAGCATG
ACACGCTACCCACGTACCCT

Downstream 100 bases:

>100_bases
ACCAATTCGACATGGAGCGACAGCCAAGCGCATATAGCAATCTCACTGAACTTACGACATCGCTCAGTCTAGTGACTGCA
CACCTGAACAATACCCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTQHNDNDDDAALFRAAIGPVRPLRPSETAITIKPRSRPRRCIIKHHEDEAKSEFAQLLRESAPLEAGDTISYRSKALPS
RLFQRLKRGQFSVQDELDLHGATVVQAETLLRQFLLEAHTYEYGCVRIIHGKGLQSNGGTPVLKNLVNQLLRLRKDVLAF
HSSPPAQGGTGAVLVLLTHR

Sequences:

>Translated_180_residues
MTQHNDNDDDAALFRAAIGPVRPLRPSETAITIKPRSRPRRCIIKHHEDEAKSEFAQLLRESAPLEAGDTISYRSKALPS
RLFQRLKRGQFSVQDELDLHGATVVQAETLLRQFLLEAHTYEYGCVRIIHGKGLQSNGGTPVLKNLVNQLLRLRKDVLAF
HSSPPAQGGTGAVLVLLTHR
>Mature_179_residues
TQHNDNDDDAALFRAAIGPVRPLRPSETAITIKPRSRPRRCIIKHHEDEAKSEFAQLLRESAPLEAGDTISYRSKALPSR
LFQRLKRGQFSVQDELDLHGATVVQAETLLRQFLLEAHTYEYGCVRIIHGKGLQSNGGTPVLKNLVNQLLRLRKDVLAFH
SSPPAQGGTGAVLVLLTHR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20059; Mature: 19928

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHNDNDDDAALFRAAIGPVRPLRPSETAITIKPRSRPRRCIIKHHEDEAKSEFAQLLR
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHH
ESAPLEAGDTISYRSKALPSRLFQRLKRGQFSVQDELDLHGATVVQAETLLRQFLLEAHT
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
YEYGCVRIIHGKGLQSNGGTPVLKNLVNQLLRLRKDVLAFHSSPPAQGGTGAVLVLLTHR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TQHNDNDDDAALFRAAIGPVRPLRPSETAITIKPRSRPRRCIIKHHEDEAKSEFAQLLR
CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHH
ESAPLEAGDTISYRSKALPSRLFQRLKRGQFSVQDELDLHGATVVQAETLLRQFLLEAHT
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
YEYGCVRIIHGKGLQSNGGTPVLKNLVNQLLRLRKDVLAFHSSPPAQGGTGAVLVLLTHR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA