Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28198426

Identifier: 28198426

GI number: 28198426

Start: 627889

End: 628419

Strand: Reverse

Name: 28198426

Synonym: PD0516

Alternate gene names: NA

Gene position: 628419-627889 (Counterclockwise)

Preceding gene: 28198429

Following gene: 28198425

Centisome position: 24.94

GC content: 48.4

Gene sequence:

>531_bases
GTGTATGCGGCTTATTACAACGGACGCCAAATATTCCATTTTGGTGTCAACGCTTCCCAAATCCACCCCGCCATCCAAGT
GTGGACAAAACGGTTCTTACCGCCCTCGGCGGTGATATCCCACGCCAAAGAGCGTAGCGCTGCGGACCCCCGCTCCTTGA
TGAAGCGTCGCACCATGTCAAATGAGCCTTCTCCGGAAGAACAGGACAAATTGCGTCAATTGGCCGCCACCATCTGGCAA
CCCTGGATCGTCAACTATTGGGATATGAACGCCACCGTTGGGAATATTCTAGCCACGGTGACGGGAGAAATTTTGAAATG
CTCAATAGCCTACAGCTTCGTACCTCAGCAAATACTAAACCCTTTTCTTAAACCGCTCTGGAAAGACAGATGGAAACTTG
TAGTTCAATATTTCGCGCAAATCATTTGGGAAAATTATAAAATATCGCAGAACCAACGCTATCAATCATGTATATACGTT
GCTGCGGCAAACTGGCGAAGCCCGATTGAAATGGCTTCCGCAGGGATCTAA

Upstream 100 bases:

>100_bases
TCACCTCAAAGATGGCGGCATCTTTTTAGATGGCTGGAAAACAGGACAACCCGACAAACAGGCCGCCGCCTTCGTGTACT
ACCCTGGGGAAACAGGCAGA

Downstream 100 bases:

>100_bases
GCAGACTCCCTCTTGCTAGCATGGTCATGGAGGTCGCTCTCTTTGTCAGCATTGGAAGCCGAAAGCAACTCATCATTGAT
TTGTCTCCGAGTGTGATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQ
PWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNPFLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYV
AAANWRSPIEMASAGI

Sequences:

>Translated_176_residues
MYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQ
PWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNPFLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYV
AAANWRSPIEMASAGI
>Mature_176_residues
MYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMSNEPSPEEQDKLRQLAATIWQ
PWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILNPFLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYV
AAANWRSPIEMASAGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20396; Mature: 20396

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMS
CCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCC
NEPSPEEQDKLRQLAATIWQPWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILN
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCCHHHHHHCCC
>Mature Secondary Structure
MYAAYYNGRQIFHFGVNASQIHPAIQVWTKRFLPPSAVISHAKERSAADPRSLMKRRTMS
CCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCC
NEPSPEEQDKLRQLAATIWQPWIVNYWDMNATVGNILATVTGEILKCSIAYSFVPQQILN
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFLKPLWKDRWKLVVQYFAQIIWENYKISQNQRYQSCIYVAAANWRSPIEMASAGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA