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The map label for this gene is 28198311

Identifier: 28198311

GI number: 28198311

Start: 477960

End: 478535

Strand: Reverse

Name: 28198311

Synonym: PD0394

Alternate gene names: NA

Gene position: 478535-477960 (Counterclockwise)

Preceding gene: 28198312

Following gene: 28198309

Centisome position: 18.99

GC content: 55.03

Gene sequence:

>576_bases
ATGAATACACGCATCTTTTTGGCCCGCATCATCTCCATACTCGGCCATCCTGGCGTACTGGGATCATTCGCAATCGCTAC
AAAACTAAGCAACACACCGACAAGTACACACGTAAAAACCGTCGTCATCAGTACTATGCTGCTAGTGACGGTACTGGGCT
TGGCCTACAGTGTATGGCAGGTTCAACGTGGATATTGGAGCCATATTGATGCCTCCAAACCAAACGAACGCGCCCAACTC
CTACCGATATTGCTGCTACTGCTCGGCATAGCCACACTCAGCCTATGGGCGCTGGACATGCCAAAACAAGTGGTCTCCGG
CCCAATCGCCGGCATCGCCCTCGTATTAGCCGCACACAGTGTACGGCACTGGATGAAACCATCTCTGCACGTCGGTTTCG
GTATTCTGGCCACAGGACTAAACAACACACTGCCAGTAGATGTCAGCCTATTGGCAGCAACGGCACTGGTTGGTTGGTCC
CGACTAGCGCTGGGTCGCCATACCCGCCGCGAGGTGGCAGTCGGTGCCGCACTGGGCGCGGCTACCGCGGCATTGTTCCG
TAGTATGAGCGAGTAA

Upstream 100 bases:

>100_bases
TGCTCTCCGAAGCGGCTATTCGGCAACACCACACTACTGTGATGCTATCTATTAAAAAATTGATGATAATTGATCCACGC
TAGATGCAACGAAAGGAACA

Downstream 100 bases:

>100_bases
TTGCGTACGAATCAGATCATGCACCCGCGTTGTACACGCCATTTTTGTAATGTGAATCACAAAATCATTCGCAAAAAATG
TAAAACAACTCAGCCACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNTRIFLARIISILGHPGVLGSFAIATKLSNTPTSTHVKTVVISTMLLVTVLGLAYSVWQVQRGYWSHIDASKPNERAQL
LPILLLLLGIATLSLWALDMPKQVVSGPIAGIALVLAAHSVRHWMKPSLHVGFGILATGLNNTLPVDVSLLAATALVGWS
RLALGRHTRREVAVGAALGAATAALFRSMSE

Sequences:

>Translated_191_residues
MNTRIFLARIISILGHPGVLGSFAIATKLSNTPTSTHVKTVVISTMLLVTVLGLAYSVWQVQRGYWSHIDASKPNERAQL
LPILLLLLGIATLSLWALDMPKQVVSGPIAGIALVLAAHSVRHWMKPSLHVGFGILATGLNNTLPVDVSLLAATALVGWS
RLALGRHTRREVAVGAALGAATAALFRSMSE
>Mature_191_residues
MNTRIFLARIISILGHPGVLGSFAIATKLSNTPTSTHVKTVVISTMLLVTVLGLAYSVWQVQRGYWSHIDASKPNERAQL
LPILLLLLGIATLSLWALDMPKQVVSGPIAGIALVLAAHSVRHWMKPSLHVGFGILATGLNNTLPVDVSLLAATALVGWS
RLALGRHTRREVAVGAALGAATAALFRSMSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20296; Mature: 20296

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: PS00287 CYSTATIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRIFLARIISILGHPGVLGSFAIATKLSNTPTSTHVKTVVISTMLLVTVLGLAYSVWQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRGYWSHIDASKPNERAQLLPILLLLLGIATLSLWALDMPKQVVSGPIAGIALVLAAHS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHH
VRHWMKPSLHVGFGILATGLNNTLPVDVSLLAATALVGWSRLALGRHTRREVAVGAALGA
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAALFRSMSE
HHHHHHHHHCC
>Mature Secondary Structure
MNTRIFLARIISILGHPGVLGSFAIATKLSNTPTSTHVKTVVISTMLLVTVLGLAYSVWQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRGYWSHIDASKPNERAQLLPILLLLLGIATLSLWALDMPKQVVSGPIAGIALVLAAHS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHH
VRHWMKPSLHVGFGILATGLNNTLPVDVSLLAATALVGWSRLALGRHTRREVAVGAALGA
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAALFRSMSE
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA