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The map label for this gene is 28198306

Identifier: 28198306

GI number: 28198306

Start: 472994

End: 473422

Strand: Reverse

Name: 28198306

Synonym: PD0389

Alternate gene names: NA

Gene position: 473422-472994 (Counterclockwise)

Preceding gene: 28198307

Following gene: 28198298

Centisome position: 18.79

GC content: 45.69

Gene sequence:

>429_bases
ATGTGCACGTTATGCCGTTGTTCGCATACACTTCGCGCCATGCCTACGAAAAAGAAAGATAGCTATGCCATAGCGGTTGG
AGAGCGTTTAGCGGCTGCGCGTAAAGCTGTTGTACCGGCTATGACTCAAAGCAAGGCAGCAGAATTACTTAGTAAAAGTT
TAGGTAAGCATATTACAGCTGCAACTATCTCCGGTTATGAAAGCGGACACCGCCTTCCTCATGTTTTTCTTGTAAACGCG
CTATGTAGTATTTATGGCACTTTAACACCCGCCTACGTTTTCCACTTCGATAACGCGGCGGAAACGATGCAAGAGTCCAA
CCTATTGAAATATTTTCGCTCAGCAGATGCACGCGATAAAAGGAATATTACTAACCTAGCCTTGCACGCGCTGAATGGGT
TGTACCCGAAATCGACCGATTCAGAATAA

Upstream 100 bases:

>100_bases
CTTAAGATAAACGGCAACCAATGGCACACCGTCTTTAAAATAGCTTCAGCGTTATTACATACTCAGCAGCGCTTTGTAAT
ATGTTGGCCGTTAAAGCGAG

Downstream 100 bases:

>100_bases
AGACGGAGAAAAGGGGCAATAAAACACTGCACGCGCTGCGTGGAATCGAGCAATCAGCCTATCTTATCAGTCGTCTGATA
GAAGTCCAAAAAAGTCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MCTLCRCSHTLRAMPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNA
LCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE

Sequences:

>Translated_142_residues
MCTLCRCSHTLRAMPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNA
LCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE
>Mature_142_residues
MCTLCRCSHTLRAMPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNA
LCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15546; Mature: 15546

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTLCRCSHTLRAMPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITA
CCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ATISGYESGHRLPHVFLVNALCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCH
RNITNLALHALNGLYPKSTDSE
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MCTLCRCSHTLRAMPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITA
CCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ATISGYESGHRLPHVFLVNALCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCH
RNITNLALHALNGLYPKSTDSE
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA