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The map label for this gene is yfdH [C]

Identifier: 28198075

GI number: 28198075

Start: 184755

End: 185768

Strand: Reverse

Name: yfdH [C]

Synonym: PD0144

Alternate gene names: 28198075

Gene position: 185768-184755 (Counterclockwise)

Preceding gene: 28198076

Following gene: 28198072

Centisome position: 7.37

GC content: 50.69

Gene sequence:

>1014_bases
ATGAATCGAGAATGCCTCACTGTTGTAGTTCCCGCATACAATGAGGCGCAAACGCTACCTCTCCTGCATCTACGCATCGT
CGCTGCATTGAATACTCTTCCAGAACTTGATGGGCGGCTGCTGTATGTTGACGATGGTAGCAACGATCGAACGTGGGACA
TCATTGAAGCATTGGTCGTCAATGATACACGTGTCGGTGGAATCAAGCTTTCACGTAACTTCGGCAAGGAAATTGCTATC
ACTGCAGGCCTGGACAACACGCCATTTGGTGCGGTTTTGCTTCTGGATGCAGATGGTCAGGATCCTCCGGAACTCATTCC
TCAGTTCGTCGCACGTTGGCGTGCTGGTTACGATAACGTCTACGGTACTCGCCTGGAACGCCAAGGTGAAGGACTGATAA
AGCGTTTCTTAGCAGCATCGTTCTACCGGATGATCGGACGCTTATCGCCTACTCCGATTCCCACTGACACAGGTGATTTC
CGCCTGCTTTCGCCGCGCGCATTACAAGCGTTGCGTCAAATACGAGAACGCCACCGTTTCATGAAGGGATTATTCGGCTG
GGTTGGCTTCCGTCAAATCGCACTGCCCTACCGGCGTGAACCGCGTCTGTCTGGACGCAGCAAGTTCACCTTCTGGCGAT
TATGGAACTTTGCACTGGAAGGTATCACCAGTTTCTCCACTGCTCCCTTACGGGTCACCACCTACCTAGGTCTGATAACC
GCCGTGTTTGCTTTTGGCTACGGTGTCTGGATCGTACTCAAAGCACTTATTCTCGGCGATCGAGTACCTGGCTGGCCAAC
AATGATGACGGTCATCTTACTTTTAGGAGGGGTACAATTGATCGCACTAGGCCTCATCGGCGAATATCTTGGTCGGCTTT
ACGACGAATCTAAAAGACGCCCTCTGTACTTTATCGATACTGCTGCAGGCATTGCAGAATGCCACCCACAACAAATCATT
GATGGAAAGATTCCTCAGAACACCGCCTCAATTGTTGATTGTGAACAACAATAG

Upstream 100 bases:

>100_bases
CGCTGTTACGTTAATCAGATTGGAAGAAAAACCAGGACGGAGCATTTCCTCCTCACCAGCAGTAGCTGACGGCCGTATTG
CACCCGTACCATACAACGAT

Downstream 100 bases:

>100_bases
AAAAACAGCCTATTACCCATCTTAAAATGGTGTGTGTCATGGAATCGGCGACCAAAGATCTATCTAGTTTTACAGATATC
CGTTGGGACCTGAATTTATA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRVGGIKLSRNFGKEIAI
TAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRLERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDF
RLLSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT
AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFIDTAAGIAECHPQQII
DGKIPQNTASIVDCEQQ

Sequences:

>Translated_337_residues
MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRVGGIKLSRNFGKEIAI
TAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRLERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDF
RLLSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT
AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFIDTAAGIAECHPQQII
DGKIPQNTASIVDCEQQ
>Mature_337_residues
MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDTRVGGIKLSRNFGKEIAI
TAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRLERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDF
RLLSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT
AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFIDTAAGIAECHPQQII
DGKIPQNTASIVDCEQQ

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=300, Percent_Identity=43, Blast_Score=271, Evalue=4e-74,
Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=33.5483870967742, Blast_Score=164, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37821; Mature: 37821

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
NDTRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV
CCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCH
YGTRLERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH
MKGLFGWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLYFIDTAAGIAECHPQQIIDGKIPQNTASIVDCEQQ
CEEEEECCCCHHHCCHHHHCCCCCCCCCHHCEECCCC
>Mature Secondary Structure
MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
NDTRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV
CCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCH
YGTRLERQGEGLIKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH
MKGLFGWVGFRQIALPYRREPRLSGRSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLYFIDTAAGIAECHPQQIIDGKIPQNTASIVDCEQQ
CEEEEECCCCHHHCCHHHHCCCCCCCCCHHCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]