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The map label for this gene is ypjD [H]

Identifier: 28198070

GI number: 28198070

Start: 177317

End: 178159

Strand: Reverse

Name: ypjD [H]

Synonym: PD0139

Alternate gene names: 28198070

Gene position: 178159-177317 (Counterclockwise)

Preceding gene: 28198072

Following gene: 77747632

Centisome position: 7.07

GC content: 46.98

Gene sequence:

>843_bases
TTGTTGTTATTGGTTATTATTGTTTTTTTTACATATTTTTTAGCGGTATGGATGCTGTTTTGTGAGTTGTTATTTAATGA
TATTTCGCGCAGAGGTGAGTGGCGTATTCCGGGGCTGGTGGGTCTATTAGCTCACGGGGGTTATCATTTTTTGGTGGTAT
TAGGCAATGCTGGTGCTGTGGACATGCATTTTTTCTCTGTTCTTTCTATGACGTTTTTTGTGATGTCTGGCTTGACAATT
TTATTTAGTACGCATGTGGGGACGGTGGGTGTGGTGGTGTTCCCTGTGGCGGGGTTATTGCTTGCTGTTTATCACGGTTA
CGGTCACTCACCCAGCCCGGAACTGGGTTGGCGTGTAGAGCTGCATGCTTGTCTAGCGTTACTAGGCTATGCGACGTTAG
GCATAGCAGCACTATTGGCGATGATGTTGTGGTTTCGGGAACGTGCGTTGCGGCGACGCAATGTTCACCACTGGCATGGT
GCTCTGCCGCCGCTGACTGAGTTAGAGAAGCTGCTTTTCCGCACGATCACGTTTGGTTTCATCCTGTTGACCTTCACTGT
ATTCACTGGTTTTTTGTTTGTGAGAGACTTTCTGGAACAGAAGTTGTTGCATAAGAGTGTGCTAAGTGTTCTGTCCTGGG
TGATATTTGGAGGGTTGTTAATTGGACGCTGGCAGTATGGCTGGCGAGGCATCAAGGCGGTGCACTGGACATTAACAGCG
ATGATGTTTTTAGTACTGGCGTTTTTTGGGAGCAAACTGATGATTGAGCTCATGCTACGTCACCAAAGCAGTTCATTATC
ACCCGTCAGGCACGCGTCATACGGAGAGCAAGGATTGAGATAA

Upstream 100 bases:

>100_bases
ATCACAGGAAGCATATCTTCATTCTGACAATGAGATGCAAACTTTTTAATTTTTGCTTTATATATTTCCATTAGAATATT
TACATTATGTGAGGTGATAA

Downstream 100 bases:

>100_bases
GCACGGTGTACTTGAGAAGCTAGCACCTCTGTCATCGGGCTCGGTAGTGGATAAGGATGATCACCTACGACACCCAACAA
TGATCATCGCTACCTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLLLVIIVFFTYFLAVWMLFCELLFNDISRRGEWRIPGLVGLLAHGGYHFLVVLGNAGAVDMHFFSVLSMTFFVMSGLTI
LFSTHVGTVGVVVFPVAGLLLAVYHGYGHSPSPELGWRVELHACLALLGYATLGIAALLAMMLWFRERALRRRNVHHWHG
ALPPLTELEKLLFRTITFGFILLTFTVFTGFLFVRDFLEQKLLHKSVLSVLSWVIFGGLLIGRWQYGWRGIKAVHWTLTA
MMFLVLAFFGSKLMIELMLRHQSSSLSPVRHASYGEQGLR

Sequences:

>Translated_280_residues
MLLLVIIVFFTYFLAVWMLFCELLFNDISRRGEWRIPGLVGLLAHGGYHFLVVLGNAGAVDMHFFSVLSMTFFVMSGLTI
LFSTHVGTVGVVVFPVAGLLLAVYHGYGHSPSPELGWRVELHACLALLGYATLGIAALLAMMLWFRERALRRRNVHHWHG
ALPPLTELEKLLFRTITFGFILLTFTVFTGFLFVRDFLEQKLLHKSVLSVLSWVIFGGLLIGRWQYGWRGIKAVHWTLTA
MMFLVLAFFGSKLMIELMLRHQSSSLSPVRHASYGEQGLR
>Mature_280_residues
MLLLVIIVFFTYFLAVWMLFCELLFNDISRRGEWRIPGLVGLLAHGGYHFLVVLGNAGAVDMHFFSVLSMTFFVMSGLTI
LFSTHVGTVGVVVFPVAGLLLAVYHGYGHSPSPELGWRVELHACLALLGYATLGIAALLAMMLWFRERALRRRNVHHWHG
ALPPLTELEKLLFRTITFGFILLTFTVFTGFLFVRDFLEQKLLHKSVLSVLSWVIFGGLLIGRWQYGWRGIKAVHWTLTA
MMFLVLAFFGSKLMIELMLRHQSSSLSPVRHASYGEQGLR

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693174, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31731; Mature: 31731

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]