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The map label for this gene is 28198061

Identifier: 28198061

GI number: 28198061

Start: 157895

End: 158710

Strand: Reverse

Name: 28198061

Synonym: PD0125

Alternate gene names: NA

Gene position: 158710-157895 (Counterclockwise)

Preceding gene: 28198066

Following gene: 28198059

Centisome position: 6.3

GC content: 41.42

Gene sequence:

>816_bases
ATGCAAACTGTCTTGAAAAAAAGAAAAAAATCAGGATATGGCTATATCCCAGATATAGCTGATATTCGTGACTTTTCATA
CACCCCAGAGAAATCTGTCATAGCTGCATTACCACCTAAAGTTGATTTAACCCCATCTTTTCAAGTTTACGATCAAGGGC
GGATCGGTTCATGTACTGCCAATGCTCTTGCTGCCGCAATTCAATTTGAACGCATCCATGACAAGCAGTCACCTGAATTC
ATTCCATCACGACTATTCATTTATTATAATGAAAGAAAAATTGAAGGCCACGTTAACTATGATTCTGGGGCGATGATCCG
TGATGGTATCAAAGTCCTCCATAAACTTGGGGTATGCCCGGAAAAGGAATGGCCCTACGGCGATACACCTGCAGATCAGA
AAACCGAGGAATTTCCACCTGGAGCTCCAGCAAGTAAAAAACCGTCAGATCAATGTTATAAGGAGGCTCGAAACTACAAA
ATCACCGAATATAGTAGAGTGGCTCAAGATATTGATCACCTTAAAGCTTGCCTCGCTGCAGGTTCACCATTTGTATTCGG
TTTTTCAGTGTATAACAGTTGGGTAGGCAATAATTCGCTCCCAGTTAAAATCCCATTACCAACCAAAAACGATAAGCTTG
AAGGTGGACACGCCGTCTTGTGTGTCGGATATGATGATGAAATAAGACACTTTCGTATCCGTAATTCATGGGGAAACAAC
GTCGGAGAAAACGGCTACTTCTGGATGCCTTATGAATACATCAGAAATAGACAATTGGCTGATGACTTTTGGGTGATTAA
GACCGTCAGAAAATAA

Upstream 100 bases:

>100_bases
AATGCAATTCTTGGAATTGCATATACAAATATATATGCAAAGCGCTAACCAAGTGGCAGTTTAAAATAAACCGATATTAA
ATTTATCAGGGTAAATTGCA

Downstream 100 bases:

>100_bases
GAAATTAAACTCGCATTAGCAGGATTTATTAAAACTCCCAAGGGGATAACACAATCCAACTTTAAGGTATTGGGTTGCTC
TGTCCCCTTGCCCAGCTTAA

Product: cysteine protease

Products: NA

Alternate protein names: Cysteine Protease; Papain Cysteine Protease Family Protein; Cysteine Proteinase; Cystein Protease Protein; C1A Family Peptidase

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MQTVLKKRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPSFQVYDQGRIGSCTANALAAAIQFERIHDKQSPEF
IPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADQKTEEFPPGAPASKKPSDQCYKEARNYK
ITEYSRVAQDIDHLKACLAAGSPFVFGFSVYNSWVGNNSLPVKIPLPTKNDKLEGGHAVLCVGYDDEIRHFRIRNSWGNN
VGENGYFWMPYEYIRNRQLADDFWVIKTVRK

Sequences:

>Translated_271_residues
MQTVLKKRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPSFQVYDQGRIGSCTANALAAAIQFERIHDKQSPEF
IPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADQKTEEFPPGAPASKKPSDQCYKEARNYK
ITEYSRVAQDIDHLKACLAAGSPFVFGFSVYNSWVGNNSLPVKIPLPTKNDKLEGGHAVLCVGYDDEIRHFRIRNSWGNN
VGENGYFWMPYEYIRNRQLADDFWVIKTVRK
>Mature_271_residues
MQTVLKKRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPSFQVYDQGRIGSCTANALAAAIQFERIHDKQSPEF
IPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADQKTEEFPPGAPASKKPSDQCYKEARNYK
ITEYSRVAQDIDHLKACLAAGSPFVFGFSVYNSWVGNNSLPVKIPLPTKNDKLEGGHAVLCVGYDDEIRHFRIRNSWGNN
VGENGYFWMPYEYIRNRQLADDFWVIKTVRK

Specific function: Unknown

COG id: COG4870

COG function: function code O; Cysteine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30868; Mature: 30868

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVLKKRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPSFQVYDQGRIGSCTA
CCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHH
NALAAAIQFERIHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCP
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHCCCC
EKEWPYGDTPADQKTEEFPPGAPASKKPSDQCYKEARNYKITEYSRVAQDIDHLKACLAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GSPFVFGFSVYNSWVGNNSLPVKIPLPTKNDKLEGGHAVLCVGYDDEIRHFRIRNSWGNN
CCCEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCC
VGENGYFWMPYEYIRNRQLADDFWVIKTVRK
CCCCCEEECCHHHHCCCCCCCHHEEEEEECC
>Mature Secondary Structure
MQTVLKKRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPSFQVYDQGRIGSCTA
CCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHH
NALAAAIQFERIHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCP
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHCCCC
EKEWPYGDTPADQKTEEFPPGAPASKKPSDQCYKEARNYKITEYSRVAQDIDHLKACLAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GSPFVFGFSVYNSWVGNNSLPVKIPLPTKNDKLEGGHAVLCVGYDDEIRHFRIRNSWGNN
CCCEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCC
VGENGYFWMPYEYIRNRQLADDFWVIKTVRK
CCCCCEEECCHHHHCCCCCCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA