| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185149
Identifier: 62185149
GI number: 62185149
Start: 599337
End: 599750
Strand: Direct
Name: 62185149
Synonym: CAB523
Alternate gene names: NA
Gene position: 599337-599750 (Clockwise)
Preceding gene: 62185148
Following gene: 62185150
Centisome position: 52.37
GC content: 38.41
Gene sequence:
>414_bases ATGGCATGCTATCTAACTTTTGGGAAACAAGATCTCAATGATTTCTCAAGCACGACAAAAGCAATGTGCATAGCTTTTGA TCTTATTACTTTCCCTGTAATCTCTGTAGTTATCAGCGTTTTATCTTGGGCTATTTTATTGATCAAAATAGTAGCAAAGA CATTAAAATTTCTCATGCTAAGCCTGTGTTTCCGTGACCAAGAAACGTCTTTCAGTGAAGTTTTTGGGGAAATAAAAACA GAAATGCTTTCTGAGCACTTGGTTCTTATTCCTTTCCTGGGCGCGATTGTTCACGGACTAATACTGACATATAAAGTGAA TCAAAGTGGCTACGCTGCTCTTGGAACCATAGATTCTATTGTCAGTTTTATGGAGGGCTCACCTCTCTATCTAGAGCATG TAGCTCGATGGTAA
Upstream 100 bases:
>100_bases CCTTATATAGAGCTACCACCAACATATGAAGAGGTTATGGAAGAAGATAGAAGAAATAGAGAAAATAATAATCCGCATAT ATAAAATTTGAGGTTATACC
Downstream 100 bases:
>100_bases AGATCTTTAAAAATAAGAAACTCTAAAGAGTGATAGCGAAATAATAGTCGTGAGTTAAAACTATAAATAATCTATAATTT CGCGTTAATTTATTTAATAT
Product: putative inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MACYLTFGKQDLNDFSSTTKAMCIAFDLITFPVISVVISVLSWAILLIKIVAKTLKFLMLSLCFRDQETSFSEVFGEIKT EMLSEHLVLIPFLGAIVHGLILTYKVNQSGYAALGTIDSIVSFMEGSPLYLEHVARW
Sequences:
>Translated_137_residues MACYLTFGKQDLNDFSSTTKAMCIAFDLITFPVISVVISVLSWAILLIKIVAKTLKFLMLSLCFRDQETSFSEVFGEIKT EMLSEHLVLIPFLGAIVHGLILTYKVNQSGYAALGTIDSIVSFMEGSPLYLEHVARW >Mature_136_residues ACYLTFGKQDLNDFSSTTKAMCIAFDLITFPVISVVISVLSWAILLIKIVAKTLKFLMLSLCFRDQETSFSEVFGEIKTE MLSEHLVLIPFLGAIVHGLILTYKVNQSGYAALGTIDSIVSFMEGSPLYLEHVARW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15277; Mature: 15146
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACYLTFGKQDLNDFSSTTKAMCIAFDLITFPVISVVISVLSWAILLIKIVAKTLKFLML CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLCFRDQETSFSEVFGEIKTEMLSEHLVLIPFLGAIVHGLILTYKVNQSGYAALGTIDSI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH VSFMEGSPLYLEHVARW HHHHCCCCHHHHHHHCC >Mature Secondary Structure ACYLTFGKQDLNDFSSTTKAMCIAFDLITFPVISVVISVLSWAILLIKIVAKTLKFLML EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLCFRDQETSFSEVFGEIKTEMLSEHLVLIPFLGAIVHGLILTYKVNQSGYAALGTIDSI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH VSFMEGSPLYLEHVARW HHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA