| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
Click here to switch to the map view.
The map label for this gene is 62185139
Identifier: 62185139
GI number: 62185139
Start: 588871
End: 589692
Strand: Direct
Name: 62185139
Synonym: CAB511
Alternate gene names: NA
Gene position: 588871-589692 (Clockwise)
Preceding gene: 62185138
Following gene: 62185141
Centisome position: 51.46
GC content: 40.02
Gene sequence:
>822_bases ATGTCAACACCTAAAACTAATATTAGTTTACCTACATTTGTTCGTTTTAATATCTACTCTAAGGATCTATCAGAAGAGAA AAAAAAACGGGCTATAACGGTATCGAAAACAATAACAGCCAAAAACACTAACCTTCAAAACCTAACTTGCACAAGCGGGA ACCTTAACTGCAAGCAGGACCTATTTGTTAGTGGGAACATGAAGATTAATGCAGGGACGAACAACCAAACAAACTTCTTT GGTAGGGTAAACCTGAGCAATCATACCATCTTATGCGACCAACAAGCATATAGCACTAATATTCACAAATTGCCGCAACA ATATGTCCCTTATCATGTTTTTCAAAGTAATAAAACTGCAGTTTCTATGCGTTCTGTTGTTTCCAGAGGACATGTAGGCC GCGGGGACGTAAAACGTGGTGTGTGGATTCCTTGGGATAAATTTGAAACTAAAGTTGAACAAGAAGGGAATCCTCAGGTG TATGTAGGCAAAGGGGTCAACTCTTGTTATCTGTATTTTCATGCCACCCAAGACAATCCTCAACTTTTCCGTATTAGTAT CGTTATGTCAAAGCACGGCGGCTGGTTGGATAACGGAACTGGCGGAGAGTGTGTGTTAGTCGCGGTTGTTAATGACAAAG AGACACTTTTACAAGGATCTACGTGTTCAGGAACAAGTTACTATAGACCTAAACCTATGGAATGGATTGCAACCACATTT CTGGCAAGAGGTAATGGGCATTTCATACTGAAAAACTTATCGTATGCTTGGCGGGTAGCTTCATTTTCTTGGAACGTAGT GCAGCTGCCTTATTTTCAATAA
Upstream 100 bases:
>100_bases CGTCAGAGTCTATACACATGCTCATATACGAAGTATGTTTTCTACGATAAGTGTGATTTGGTTCCCATTTGCATCAAGAT TTCCTGAGGAGGATTAAAAT
Downstream 100 bases:
>100_bases ATATACTCAACTTTTGCCCGGGAACTATTCTCCAGGCACTTTGTTCACAACTCGACCTACCAAGTCATAACCCACATATC CCGTAATTTCGATGAGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSTPKTNISLPTFVRFNIYSKDLSEEKKKRAITVSKTITAKNTNLQNLTCTSGNLNCKQDLFVSGNMKINAGTNNQTNFF GRVNLSNHTILCDQQAYSTNIHKLPQQYVPYHVFQSNKTAVSMRSVVSRGHVGRGDVKRGVWIPWDKFETKVEQEGNPQV YVGKGVNSCYLYFHATQDNPQLFRISIVMSKHGGWLDNGTGGECVLVAVVNDKETLLQGSTCSGTSYYRPKPMEWIATTF LARGNGHFILKNLSYAWRVASFSWNVVQLPYFQ
Sequences:
>Translated_273_residues MSTPKTNISLPTFVRFNIYSKDLSEEKKKRAITVSKTITAKNTNLQNLTCTSGNLNCKQDLFVSGNMKINAGTNNQTNFF GRVNLSNHTILCDQQAYSTNIHKLPQQYVPYHVFQSNKTAVSMRSVVSRGHVGRGDVKRGVWIPWDKFETKVEQEGNPQV YVGKGVNSCYLYFHATQDNPQLFRISIVMSKHGGWLDNGTGGECVLVAVVNDKETLLQGSTCSGTSYYRPKPMEWIATTF LARGNGHFILKNLSYAWRVASFSWNVVQLPYFQ >Mature_272_residues STPKTNISLPTFVRFNIYSKDLSEEKKKRAITVSKTITAKNTNLQNLTCTSGNLNCKQDLFVSGNMKINAGTNNQTNFFG RVNLSNHTILCDQQAYSTNIHKLPQQYVPYHVFQSNKTAVSMRSVVSRGHVGRGDVKRGVWIPWDKFETKVEQEGNPQVY VGKGVNSCYLYFHATQDNPQLFRISIVMSKHGGWLDNGTGGECVLVAVVNDKETLLQGSTCSGTSYYRPKPMEWIATTFL ARGNGHFILKNLSYAWRVASFSWNVVQLPYFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30767; Mature: 30636
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPKTNISLPTFVRFNIYSKDLSEEKKKRAITVSKTITAKNTNLQNLTCTSGNLNCKQD CCCCCCCCCCCEEEEEEEECCCHHHHHHHCEEEEEEEEEECCCCCCEEEEECCCCCCCEE LFVSGNMKINAGTNNQTNFFGRVNLSNHTILCDQQAYSTNIHKLPQQYVPYHVFQSNKTA EEEECCEEEECCCCCCCEEEEEEECCCCEEEECCHHHCCCHHHCCHHHCCEEEEECCCCH VSMRSVVSRGHVGRGDVKRGVWIPWDKFETKVEQEGNPQVYVGKGVNSCYLYFHATQDNP HHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCC QLFRISIVMSKHGGWLDNGTGGECVLVAVVNDKETLLQGSTCSGTSYYRPKPMEWIATTF EEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHEEECCCCCCCCCCCCCCHHHHEEEH LARGNGHFILKNLSYAWRVASFSWNVVQLPYFQ EECCCCCEEEECCCEEEEEEEECCCEEEECCCC >Mature Secondary Structure STPKTNISLPTFVRFNIYSKDLSEEKKKRAITVSKTITAKNTNLQNLTCTSGNLNCKQD CCCCCCCCCCEEEEEEEECCCHHHHHHHCEEEEEEEEEECCCCCCEEEEECCCCCCCEE LFVSGNMKINAGTNNQTNFFGRVNLSNHTILCDQQAYSTNIHKLPQQYVPYHVFQSNKTA EEEECCEEEECCCCCCCEEEEEEECCCCEEEECCHHHCCCHHHCCHHHCCEEEEECCCCH VSMRSVVSRGHVGRGDVKRGVWIPWDKFETKVEQEGNPQVYVGKGVNSCYLYFHATQDNP HHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCC QLFRISIVMSKHGGWLDNGTGGECVLVAVVNDKETLLQGSTCSGTSYYRPKPMEWIATTF EEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHEEECCCCCCCCCCCCCCHHHHEEEH LARGNGHFILKNLSYAWRVASFSWNVVQLPYFQ EECCCCCEEEECCCEEEEEEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA