| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is yidA [C]
Identifier: 62185006
GI number: 62185006
Start: 430029
End: 430916
Strand: Direct
Name: yidA [C]
Synonym: CAB374
Alternate gene names: 62185006
Gene position: 430029-430916 (Clockwise)
Preceding gene: 62185000
Following gene: 62185008
Centisome position: 37.58
GC content: 40.99
Gene sequence:
>888_bases ATGGATAAATTGCTCATTACGGATATAGACGGTACGATTACTCATCTTCCACACCATTTGGATCCTAAAATTGTTCAGCG TTTAATCCATCTCCATCATGCTGGGTGGGGCATATTTTTTCTTACTGGCAGGTATTTTTCTTACGCGCATCAGCTCTTCA AAGATTTTCCTATTCCCTATTTATTGGGTTGTCAAAATGGTGCTTGTGTTTGGTCTTCAGTAGAGAATCAATTTCTATAT TTTCAAAATATTCCCCATGAAATTTTACCCGCGTTAGAAATGTGTGTAGAGGATAGTCATGTCGTTTGTTCTATAGAATC GGGAGCTCTGTATCAAGACCATTATTATCGCCACGTTGATTGTTCTACTGCGAAAGATCTTTTGCGTCACCTAGACCCTG TGTATTTTCCTAGTGCGAAAGACCGCGAGAGATTAGTAGAAACTAAAAAACTGTCTAAGGACTATCCTAACGCCACGTTT GCTGTTGCGAAAATCTTTGGTAAGAAAAACGAGGTAGAAAAGGTCCAGGAGAGGATTATCCAATCGCAAGAGTTAGTGAA CAATTTGACCATTACATTCATGCGTTGGCCGTTTGATTTTGACTATGCCATTTTGTTCATGACGGACAAATCCGTCTCTA AGGGTTGTGCTGTGGATCGTGTCGTTGACATAGTTTATGAGGGACAAAAGCCGTTTATTATAGCTTCAGGGGATGATGCG AATGATATTGATTTGATAGAGCATGGTGACTTTAAGATCGTCATGAGCTCCGCTCCGGAATCTATGCATATGATTGCAGA TTTTCTTGCCTCCCCAGCGAAAGAGCTAGGTATTCTTTCGGCATGGGAGGCAGGTGTTGCACAATACCACAGAATTAAGA ACGCTTAG
Upstream 100 bases:
>100_bases TATATTGATTTTGTTCTTTATTATAGACCGATTTTCATGCCTGAGAATCAGGCGCGGTGAAAGGAGCGAAATCAGTTTAA GGGGAGTGGTAAAGTTACTT
Downstream 100 bases:
>100_bases GAAGCATTTCAGGACCAATGCCCATGATATTGGCGCCGTGATCCACATAGAGAGTTTCTCCGGTAATTGCGCTAGCTAAC GGAGAAGCTAGAAAAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Superfamily Hydrolase/Phosphatase; HAD Superfamily Hydrolase; HAD Family Phosphatase/Phosphatase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MDKLLITDIDGTITHLPHHLDPKIVQRLIHLHHAGWGIFFLTGRYFSYAHQLFKDFPIPYLLGCQNGACVWSSVENQFLY FQNIPHEILPALEMCVEDSHVVCSIESGALYQDHYYRHVDCSTAKDLLRHLDPVYFPSAKDRERLVETKKLSKDYPNATF AVAKIFGKKNEVEKVQERIIQSQELVNNLTITFMRWPFDFDYAILFMTDKSVSKGCAVDRVVDIVYEGQKPFIIASGDDA NDIDLIEHGDFKIVMSSAPESMHMIADFLASPAKELGILSAWEAGVAQYHRIKNA
Sequences:
>Translated_295_residues MDKLLITDIDGTITHLPHHLDPKIVQRLIHLHHAGWGIFFLTGRYFSYAHQLFKDFPIPYLLGCQNGACVWSSVENQFLY FQNIPHEILPALEMCVEDSHVVCSIESGALYQDHYYRHVDCSTAKDLLRHLDPVYFPSAKDRERLVETKKLSKDYPNATF AVAKIFGKKNEVEKVQERIIQSQELVNNLTITFMRWPFDFDYAILFMTDKSVSKGCAVDRVVDIVYEGQKPFIIASGDDA NDIDLIEHGDFKIVMSSAPESMHMIADFLASPAKELGILSAWEAGVAQYHRIKNA >Mature_295_residues MDKLLITDIDGTITHLPHHLDPKIVQRLIHLHHAGWGIFFLTGRYFSYAHQLFKDFPIPYLLGCQNGACVWSSVENQFLY FQNIPHEILPALEMCVEDSHVVCSIESGALYQDHYYRHVDCSTAKDLLRHLDPVYFPSAKDRERLVETKKLSKDYPNATF AVAKIFGKKNEVEKVQERIIQSQELVNNLTITFMRWPFDFDYAILFMTDKSVSKGCAVDRVVDIVYEGQKPFIIASGDDA NDIDLIEHGDFKIVMSSAPESMHMIADFLASPAKELGILSAWEAGVAQYHRIKNA
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33680; Mature: 33680
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLLITDIDGTITHLPHHLDPKIVQRLIHLHHAGWGIFFLTGRYFSYAHQLFKDFPIPY CCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCE LLGCQNGACVWSSVENQFLYFQNIPHEILPALEMCVEDSHVVCSIESGALYQDHYYRHVD EEECCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCEEECC CSTAKDLLRHLDPVYFPSAKDRERLVETKKLSKDYPNATFAVAKIFGKKNEVEKVQERII HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH QSQELVNNLTITFMRWPFDFDYAILFMTDKSVSKGCAVDRVVDIVYEGQKPFIIASGDDA HHHHHHHCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCC NDIDLIEHGDFKIVMSSAPESMHMIADFLASPAKELGILSAWEAGVAQYHRIKNA CCCCEEECCCEEEEECCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKLLITDIDGTITHLPHHLDPKIVQRLIHLHHAGWGIFFLTGRYFSYAHQLFKDFPIPY CCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCE LLGCQNGACVWSSVENQFLYFQNIPHEILPALEMCVEDSHVVCSIESGALYQDHYYRHVD EEECCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCEEECC CSTAKDLLRHLDPVYFPSAKDRERLVETKKLSKDYPNATFAVAKIFGKKNEVEKVQERII HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH QSQELVNNLTITFMRWPFDFDYAILFMTDKSVSKGCAVDRVVDIVYEGQKPFIIASGDDA HHHHHHHCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCC NDIDLIEHGDFKIVMSSAPESMHMIADFLASPAKELGILSAWEAGVAQYHRIKNA CCCCEEECCCEEEEECCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA