| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184889
Identifier: 62184889
GI number: 62184889
Start: 267808
End: 269052
Strand: Direct
Name: 62184889
Synonym: CAB247
Alternate gene names: NA
Gene position: 267808-269052 (Clockwise)
Preceding gene: 62184888
Following gene: 62184891
Centisome position: 23.4
GC content: 42.49
Gene sequence:
>1245_bases GTGGATACCATGGGAAGACTGTTACGATATGGCTGCTGTCTATGCAGTTTAGTATTTATTGGCTATTTTTCATCTTGTGT AACTGCAGGAGCTCAGGAAGCTGGGCGTTGTCCTGATTGTGAGAGCTTTAAAAAAGCTGTTCATCGCTCGGATCAACTAC CTGAAAATATTCAAGAATCCGAAAATGGTTGTTATCTTACGGGGTATGTACAAGCCCTCGTAGATATGCATTTTTTAGAT AGCTGCACCCAAGTGGTTGTTGAGGATAACGTTGCTTATGTATTCTCCCTTCCTGTCGATACGGTACTTTCTCATGCGAT TATAGATTTTATCAAAGATTTACCGTTTATTGCTTCTGTAGAGATTTGTACTCGCTCCTATCAAGAGTGTTGTAAGGGAT ATAGAGAAGATCGTCCTATATTACCCAAGCAGAAGGCCTTAGGAACGGAAATTGTCTGTGGTAAAGAAGGTCTCTGGTTA CCACAAAATACCATACTCTTTGCACCGTTAATTGCCGATCCTCGCCAAGTGACAAATAGTGCCGGCATTCGTTTTAATGA GAAGGTTATCGGGAACCGCGTAGGTTCTGCGATTTTTGGTGGCGACTTTATTTTGCTACGCCTTTTCGATGTTTCTCGTT TCCATGGGGATTTAGATATTGGCCTTCAAGGGGGAGTTTTTTCCGTTTTTGATTTAGATCATCCGGATTCCTGCATGGTC AACTCGGACTTTTTCGTCGCCGGTTTGTTGGGATTCGCTGTTGATAAATGGAGTTTTCGTTTACGCCTTTGGCATTTGTC TTCACATTTGGGAGATGAATTTCTTTTAACGCATCCGGATTTCCCAAGATTTAACCTCAGTGACGAGGGTATCGATGTGT TTGCTTCCTTGCACTATAACCCGCAGATACGTCTGTACGGGGGAGTCGGTTACATTATCAGTAGAGATTTGACTTTTCCT GAACGCCCTTTATACATAGAAGCAGGAGCAGAATTACGTCCTTTTGGATTGCGCGAGGGGAATTTACATGCTCAGCCGAT TTTTGCTATGCATTTTCGTTTCTGGGAAGAACAGCATTTTGGCATAGATCAGACCTATATCTTAGGTATGGAGTGGTCAA AATTTCGTGATGTAGGCAGAAAAATCCGTGCATTTGTCGAATACCATCAAGGGTTTTCTAAAGAAGGACAGTTTGTGCGA GAGCCGTGTAATTACTACGGCTTTCGCTTAACCTATGGCTTCTAA
Upstream 100 bases:
>100_bases ATTCTTCTCAAGGTATTTCGGAAGAAAACGTGTATCTACAGGGATTTTTCTTAATCTATGTGTGAGGTGTTGCTAAATAA ATCATCTCTTTCTATAGATT
Downstream 100 bases:
>100_bases TCATACCTCTAAAAATCCCTCGGGATAAGGAGGATATTCGGGACCTATAGGCAACGTGTTGTCGATATATCTTTGGAAAA TTTCTATACCAGCTTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MDTMGRLLRYGCCLCSLVFIGYFSSCVTAGAQEAGRCPDCESFKKAVHRSDQLPENIQESENGCYLTGYVQALVDMHFLD SCTQVVVEDNVAYVFSLPVDTVLSHAIIDFIKDLPFIASVEICTRSYQECCKGYREDRPILPKQKALGTEIVCGKEGLWL PQNTILFAPLIADPRQVTNSAGIRFNEKVIGNRVGSAIFGGDFILLRLFDVSRFHGDLDIGLQGGVFSVFDLDHPDSCMV NSDFFVAGLLGFAVDKWSFRLRLWHLSSHLGDEFLLTHPDFPRFNLSDEGIDVFASLHYNPQIRLYGGVGYIISRDLTFP ERPLYIEAGAELRPFGLREGNLHAQPIFAMHFRFWEEQHFGIDQTYILGMEWSKFRDVGRKIRAFVEYHQGFSKEGQFVR EPCNYYGFRLTYGF
Sequences:
>Translated_414_residues MDTMGRLLRYGCCLCSLVFIGYFSSCVTAGAQEAGRCPDCESFKKAVHRSDQLPENIQESENGCYLTGYVQALVDMHFLD SCTQVVVEDNVAYVFSLPVDTVLSHAIIDFIKDLPFIASVEICTRSYQECCKGYREDRPILPKQKALGTEIVCGKEGLWL PQNTILFAPLIADPRQVTNSAGIRFNEKVIGNRVGSAIFGGDFILLRLFDVSRFHGDLDIGLQGGVFSVFDLDHPDSCMV NSDFFVAGLLGFAVDKWSFRLRLWHLSSHLGDEFLLTHPDFPRFNLSDEGIDVFASLHYNPQIRLYGGVGYIISRDLTFP ERPLYIEAGAELRPFGLREGNLHAQPIFAMHFRFWEEQHFGIDQTYILGMEWSKFRDVGRKIRAFVEYHQGFSKEGQFVR EPCNYYGFRLTYGF >Mature_414_residues MDTMGRLLRYGCCLCSLVFIGYFSSCVTAGAQEAGRCPDCESFKKAVHRSDQLPENIQESENGCYLTGYVQALVDMHFLD SCTQVVVEDNVAYVFSLPVDTVLSHAIIDFIKDLPFIASVEICTRSYQECCKGYREDRPILPKQKALGTEIVCGKEGLWL PQNTILFAPLIADPRQVTNSAGIRFNEKVIGNRVGSAIFGGDFILLRLFDVSRFHGDLDIGLQGGVFSVFDLDHPDSCMV NSDFFVAGLLGFAVDKWSFRLRLWHLSSHLGDEFLLTHPDFPRFNLSDEGIDVFASLHYNPQIRLYGGVGYIISRDLTFP ERPLYIEAGAELRPFGLREGNLHAQPIFAMHFRFWEEQHFGIDQTYILGMEWSKFRDVGRKIRAFVEYHQGFSKEGQFVR EPCNYYGFRLTYGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47037; Mature: 47037
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTMGRLLRYGCCLCSLVFIGYFSSCVTAGAQEAGRCPDCESFKKAVHRSDQLPENIQES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHC ENGCYLTGYVQALVDMHFLDSCTQVVVEDNVAYVFSLPVDTVLSHAIIDFIKDLPFIASV CCCEEEHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHCCCCHHHH EICTRSYQECCKGYREDRPILPKQKALGTEIVCGKEGLWLPQNTILFAPLIADPRQVTNS HHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHCC AGIRFNEKVIGNRVGSAIFGGDFILLRLFDVSRFHGDLDIGLQGGVFSVFDLDHPDSCMV CCCEECHHHHHHHHCCHHCCCCEEEEEHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEE NSDFFVAGLLGFAVDKWSFRLRLWHLSSHLGDEFLLTHPDFPRFNLSDEGIDVFASLHYN CCCHHHHHHHHHHHCCCEEEEEEEEHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEECC PQIRLYGGVGYIISRDLTFPERPLYIEAGAELRPFGLREGNLHAQPIFAMHFRFWEEQHF CEEEEEECEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GIDQTYILGMEWSKFRDVGRKIRAFVEYHQGFSKEGQFVREPCNYYGFRLTYGF CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCEEEEECC >Mature Secondary Structure MDTMGRLLRYGCCLCSLVFIGYFSSCVTAGAQEAGRCPDCESFKKAVHRSDQLPENIQES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHC ENGCYLTGYVQALVDMHFLDSCTQVVVEDNVAYVFSLPVDTVLSHAIIDFIKDLPFIASV CCCEEEHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHCCCCHHHH EICTRSYQECCKGYREDRPILPKQKALGTEIVCGKEGLWLPQNTILFAPLIADPRQVTNS HHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHCC AGIRFNEKVIGNRVGSAIFGGDFILLRLFDVSRFHGDLDIGLQGGVFSVFDLDHPDSCMV CCCEECHHHHHHHHCCHHCCCCEEEEEHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEE NSDFFVAGLLGFAVDKWSFRLRLWHLSSHLGDEFLLTHPDFPRFNLSDEGIDVFASLHYN CCCHHHHHHHHHHHCCCEEEEEEEEHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEECC PQIRLYGGVGYIISRDLTFPERPLYIEAGAELRPFGLREGNLHAQPIFAMHFRFWEEQHF CEEEEEECEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GIDQTYILGMEWSKFRDVGRKIRAFVEYHQGFSKEGQFVREPCNYYGFRLTYGF CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA