Click here to switch to the map view.

The map label for this gene is yggU [C]

Identifier: 62184885

GI number: 62184885

Start: 263842

End: 264132

Strand: Direct

Name: yggU [C]

Synonym: CAB243

Alternate gene names: 62184885

Gene position: 263842-264132 (Clockwise)

Preceding gene: 62184884

Following gene: 62184888

Centisome position: 23.06

GC content: 40.89

Gene sequence:

>291_bases
TTGCATCAAGAATATTGGATTTTAGAGGTGAAGGTCACCCCAAAGTCTAAACAAAATACAATTGTGGGATTTGAAGGCGA
GGTATTAAAAATACGTGTTACTGAGGTCCCAGAAAAAGGTAAGGCTAACGAAGCAGTTATTGCTTTGTTAGCCAAAGCAT
TGTCTTTGCCTAAGCGTGACATCACGTTAATTCCTGGAGATACTTCCAGGAAAAAAAGAATCCTCTTACCGAAGTCTACG
GAATCGATTGTCTCTCATTGGCGAGAAAAGGGATTTTACGCAGGGCTGTAG

Upstream 100 bases:

>100_bases
GTGTTAAAGCATGACTGGGCTCCTAGAATTTGTCTACATTCTTTAGCTGCCTGGGCAAGTGAAACTGGCGGCCATCTTGT
CATATCTCAGGAGTAACCTT

Downstream 100 bases:

>100_bases
TTTTTATCGGTGTCTGGTTTATCGCTTTTTACCGCGGCTTTTTTATCTTTATTATCTTTAAAGATTATAGAACGGAATTG
TTTGCGTTCTGTTCTGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MHQEYWILEVKVTPKSKQNTIVGFEGEVLKIRVTEVPEKGKANEAVIALLAKALSLPKRDITLIPGDTSRKKRILLPKST
ESIVSHWREKGFYAGL

Sequences:

>Translated_96_residues
MHQEYWILEVKVTPKSKQNTIVGFEGEVLKIRVTEVPEKGKANEAVIALLAKALSLPKRDITLIPGDTSRKKRILLPKST
ESIVSHWREKGFYAGL
>Mature_96_residues
MHQEYWILEVKVTPKSKQNTIVGFEGEVLKIRVTEVPEKGKANEAVIALLAKALSLPKRDITLIPGDTSRKKRILLPKST
ESIVSHWREKGFYAGL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y243_CHLAB (Q5L6M2)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_219670.1
- ProteinModelPortal:   Q5L6M2
- SMR:   Q5L6M2
- GeneID:   3337893
- GenomeReviews:   CR848038_GR
- KEGG:   cab:CAB243
- HOGENOM:   HBG472132
- OMA:   EYWILEV
- ProtClustDB:   PRK00647
- BioCyc:   CABO218497:CAB243-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10826; Mature: 10826

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQEYWILEVKVTPKSKQNTIVGFEGEVLKIRVTEVPEKGKANEAVIALLAKALSLPKRD
CCCCEEEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
ITLIPGDTSRKKRILLPKSTESIVSHWREKGFYAGL
EEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHQEYWILEVKVTPKSKQNTIVGFEGEVLKIRVTEVPEKGKANEAVIALLAKALSLPKRD
CCCCEEEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
ITLIPGDTSRKKRILLPKSTESIVSHWREKGFYAGL
EEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA