| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184883
Identifier: 62184883
GI number: 62184883
Start: 261590
End: 262786
Strand: Direct
Name: 62184883
Synonym: CAB241
Alternate gene names: NA
Gene position: 261590-262786 (Clockwise)
Preceding gene: 62184866
Following gene: 62184884
Centisome position: 22.86
GC content: 42.69
Gene sequence:
>1197_bases ATGGCATCAGTAAGTGGAAATCCCAGTCAAAATCCTAATCCCCTCCCGGAAGATCTCCATGCTCGTTTGGGTCAAACGGA TACTTCGAAAGAGCAGGAGGAAGCAGAAAGTGGTGTTACTGAGACGGGGTTGAGTATCGAGGTTTTATCTATTGGTGAGT TGGCGAATATAGATGCTGCGATCTCGGATATACAGACTGTTGCTGGTGCCGTCATTGCTGGAGGTGCCCCTTCGAGTTTA TCTCCCAATTCACCGGAGGCGGCGGCTTTATCTGCAGAATTAGTCACGGATTTTTATGAAGATAGCCTGGATAGAGAAGA TTCTGATAAAATTGACGAAGCTGTGGCCAGCTTATTTACTGGAGTTCAAGATAGTAGGGTGTTAGTTGATGATCTCAAGA AAAGGATCGAGGATTTTCAGAAAGTACAACTGGATGCCAAGCAGGTGTTTAAAAGATCTCAACTTGGTGAAGGTCTGGAT TTAGACGAGATGTATCTTGACATGCGTCGTGAACTCGCCTCATTGAATGGTCAGGTAAACGAGTTAGAGAGTTTATCTCA TAGGTTATTAGCTACTTTAGGAGACGTACACCATGGGTTGCTGTCTATGTCTTTAGAGAAATTTCATGAGACTTTTGGGG ATCAGAGTGATCGTGTACGTGCGTATCTAGAGAAACTAGGATTGATCCGTGGTGACGAAAGTTGGACAATTGATTCCTCG GGTGCGGTGCCGAAGTTAGCTTTAGCAATTCAAAATCAGCGTATTGCTTTAGAAAAACTGGTGATTCCTACGGAAGAAGA GTTTATTCAAGCGGCGACAGAGGCGGGAGCTTCTGGCTTTCAGGCCATAATCAATAGGCTGAAAACGTTATGGAACACCT TAGTACAGATGTTTCACACTCTTTATGACAAATTGCTCTTTTTCCTATTGTGGATTGGCAAGAAACTTCGAGGTGGCCAG AGATCTTCTTCTGTGGCTCAGAATGAGAAAAATCCTCAATTTGAAAATCCCTTCGCATCGACTTCAGGAAGTGTTGTATC TCGTGAAAATACATCTTCTTTAAGAGCTTCGGTTTCCGGAAGGGGGGATTTATCAGATGAGGAGATGATCCGGCGTCCTG AAGACAATACTATAGATACACAAAATGTTCATAATCAAGATGAAAAGAATAATAAAATGTATCTTGATGACTTTTAA
Upstream 100 bases:
>100_bases TTATTTACACTGACCTTTTGTTTTTAAAAAATAAATACGCAATTAGATATAAATATAATTAATTAAAAATAAGATTTTTT TATTTTTGTTTGGTAATTCT
Downstream 100 bases:
>100_bases AATTAAATAAATGAGGATGATAACAATCTGTTTGAAAGTTGTTTTTTTTGAAATTCTTTAGTATGTTCACCCTTGTTATT ATAGATTGTTTAGGACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MASVSGNPSQNPNPLPEDLHARLGQTDTSKEQEEAESGVTETGLSIEVLSIGELANIDAAISDIQTVAGAVIAGGAPSSL SPNSPEAAALSAELVTDFYEDSLDREDSDKIDEAVASLFTGVQDSRVLVDDLKKRIEDFQKVQLDAKQVFKRSQLGEGLD LDEMYLDMRRELASLNGQVNELESLSHRLLATLGDVHHGLLSMSLEKFHETFGDQSDRVRAYLEKLGLIRGDESWTIDSS GAVPKLALAIQNQRIALEKLVIPTEEEFIQAATEAGASGFQAIINRLKTLWNTLVQMFHTLYDKLLFFLLWIGKKLRGGQ RSSSVAQNEKNPQFENPFASTSGSVVSRENTSSLRASVSGRGDLSDEEMIRRPEDNTIDTQNVHNQDEKNNKMYLDDF
Sequences:
>Translated_398_residues MASVSGNPSQNPNPLPEDLHARLGQTDTSKEQEEAESGVTETGLSIEVLSIGELANIDAAISDIQTVAGAVIAGGAPSSL SPNSPEAAALSAELVTDFYEDSLDREDSDKIDEAVASLFTGVQDSRVLVDDLKKRIEDFQKVQLDAKQVFKRSQLGEGLD LDEMYLDMRRELASLNGQVNELESLSHRLLATLGDVHHGLLSMSLEKFHETFGDQSDRVRAYLEKLGLIRGDESWTIDSS GAVPKLALAIQNQRIALEKLVIPTEEEFIQAATEAGASGFQAIINRLKTLWNTLVQMFHTLYDKLLFFLLWIGKKLRGGQ RSSSVAQNEKNPQFENPFASTSGSVVSRENTSSLRASVSGRGDLSDEEMIRRPEDNTIDTQNVHNQDEKNNKMYLDDF >Mature_397_residues ASVSGNPSQNPNPLPEDLHARLGQTDTSKEQEEAESGVTETGLSIEVLSIGELANIDAAISDIQTVAGAVIAGGAPSSLS PNSPEAAALSAELVTDFYEDSLDREDSDKIDEAVASLFTGVQDSRVLVDDLKKRIEDFQKVQLDAKQVFKRSQLGEGLDL DEMYLDMRRELASLNGQVNELESLSHRLLATLGDVHHGLLSMSLEKFHETFGDQSDRVRAYLEKLGLIRGDESWTIDSSG AVPKLALAIQNQRIALEKLVIPTEEEFIQAATEAGASGFQAIINRLKTLWNTLVQMFHTLYDKLLFFLLWIGKKLRGGQR SSSVAQNEKNPQFENPFASTSGSVVSRENTSSLRASVSGRGDLSDEEMIRRPEDNTIDTQNVHNQDEKNNKMYLDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0499/CT_392/TC_0671 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43784; Mature: 43653
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVSGNPSQNPNPLPEDLHARLGQTDTSKEQEEAESGVTETGLSIEVLSIGELANIDAA CCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHHCCCEEEEEECCCHHHHHHH ISDIQTVAGAVIAGGAPSSLSPNSPEAAALSAELVTDFYEDSLDREDSDKIDEAVASLFT HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GVQDSRVLVDDLKKRIEDFQKVQLDAKQVFKRSQLGEGLDLDEMYLDMRRELASLNGQVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH ELESLSHRLLATLGDVHHGLLSMSLEKFHETFGDQSDRVRAYLEKLGLIRGDESWTIDSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCEEECCC GAVPKLALAIQNQRIALEKLVIPTEEEFIQAATEAGASGFQAIINRLKTLWNTLVQMFHT CCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LYDKLLFFLLWIGKKLRGGQRSSSVAQNEKNPQFENPFASTSGSVVSRENTSSLRASVSG HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCC RGDLSDEEMIRRPEDNTIDTQNVHNQDEKNNKMYLDDF CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure ASVSGNPSQNPNPLPEDLHARLGQTDTSKEQEEAESGVTETGLSIEVLSIGELANIDAA CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHHCCCEEEEEECCCHHHHHHH ISDIQTVAGAVIAGGAPSSLSPNSPEAAALSAELVTDFYEDSLDREDSDKIDEAVASLFT HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GVQDSRVLVDDLKKRIEDFQKVQLDAKQVFKRSQLGEGLDLDEMYLDMRRELASLNGQVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH ELESLSHRLLATLGDVHHGLLSMSLEKFHETFGDQSDRVRAYLEKLGLIRGDESWTIDSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCEEECCC GAVPKLALAIQNQRIALEKLVIPTEEEFIQAATEAGASGFQAIINRLKTLWNTLVQMFHT CCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LYDKLLFFLLWIGKKLRGGQRSSSVAQNEKNPQFENPFASTSGSVVSRENTSSLRASVSG HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCC RGDLSDEEMIRRPEDNTIDTQNVHNQDEKNNKMYLDDF CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]