| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
Click here to switch to the map view.
The map label for this gene is 62184712
Identifier: 62184712
GI number: 62184712
Start: 80525
End: 81679
Strand: Direct
Name: 62184712
Synonym: CAB065
Alternate gene names: NA
Gene position: 80525-81679 (Clockwise)
Preceding gene: 62184711
Following gene: 62184718
Centisome position: 7.04
GC content: 39.65
Gene sequence:
>1155_bases ATGATGTTAGATTTGCGATTTTCTACAGACTATTACTTGCGCGTTCTCGAACTAGCTATTCGTGATGAGTCTCGGATTCT TGTTTATAATAAAAAACACCATCTTTTAGAAACTTGGCCTATACATACCGTTCTTTCTCCCGATCAGGACGCTATGAAAG AGACAATCCAAAAAGTTATTCAAGAGCTTTTTTCCCGTTCAGTAATTTCGTACGCTCTGTCAGGAAGACTCCTTTCTATT ATCGATATGCGCCTGCGTCAGGAACTACCTTACACTCGTATTCTCTACAAAATATTTCGCAAAGATACTTTCACAAGAAA AACGAGCGTCATCCAAAAGCTCCTGAAGCTAAAGAATATCATTTTCTTAGAACGCCAACGCCCTTTAAATAAAGTTTCCA ATGTAGCAAGTTCCGTATTTGCAAAAGAGAAAACAAATTTTTCTTCCTGGGAAGATTTTACCCATGATGTAGAAATCCAT GCCGAGAGTGCTGATGCGCACTTGTCTGTAAAAGAGATCATAACTGCAGAGTCTTCTTCTCAAGTGATTATGGAAGCTTT AATGACATTTTTAGAGAGCCAGGCAATGTATCTTCCCTTAAGCTTAGAACTGCTAGATCAATTCGTTGCTGAGAAAGCTA TTCCTTTGCAGACTTTGTCAGAAAAAAGTTTCGCCTTATTGTCAGAACTAAAAAATCTCTATACACTCAGTCGAGAAGAT TTCCAAGCAGTCATCGGTGGGGTGATCACCAACTCTCTTTCTGCTATGTTGACGAACTCCTTGGTAGGTTCTCTATTATT CACTCCACAGGGGAAAGCTATGGTGAACACCTGGCAAGAAGTCGCGGAATTTTCCCCGAAGGAAGCAAACGCTGCTCAAG GATTTCTTGCAGAAATCCTTCGGCGTATCATATCAGAAGATCTAAAAACTGCTGCCGCCATTGTCAATGAAGCAACTCCA GAACAAATCGGGAGAATGTATAGCATTCGTGACTATAGTCCCGGACTCTGGTTGAAAATGCTGCAGATGCTTCTGATGCG CTGGCTTTTAGATTTCGATGAAAAGGTCTATTCTTTATTGAAAAAAAGTATTAACTATTACACTCCAGAACCGTCGTTTT GGCAGCAAATCTTGTGTATATTTAAAAAATTCTAA
Upstream 100 bases:
>100_bases GACCAACAGCTCTAGGGAATCTATTTTCTTCGAATAAAAATAATGCAATAATATTCCCTCTAGAGAATAAGCAAGAAAAA CGTTAGGACCTTGTTCTCCT
Downstream 100 bases:
>100_bases TATTTTTTATTCTGTTATAGAGATGGTTCTCTACTTTGGAGAGGTAAGTACTCTAGTTATTTTTTCTTTTACAGTTTTTT CAAAGGAAAATAACGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MMLDLRFSTDYYLRVLELAIRDESRILVYNKKHHLLETWPIHTVLSPDQDAMKETIQKVIQELFSRSVISYALSGRLLSI IDMRLRQELPYTRILYKIFRKDTFTRKTSVIQKLLKLKNIIFLERQRPLNKVSNVASSVFAKEKTNFSSWEDFTHDVEIH AESADAHLSVKEIITAESSSQVIMEALMTFLESQAMYLPLSLELLDQFVAEKAIPLQTLSEKSFALLSELKNLYTLSRED FQAVIGGVITNSLSAMLTNSLVGSLLFTPQGKAMVNTWQEVAEFSPKEANAAQGFLAEILRRIISEDLKTAAAIVNEATP EQIGRMYSIRDYSPGLWLKMLQMLLMRWLLDFDEKVYSLLKKSINYYTPEPSFWQQILCIFKKF
Sequences:
>Translated_384_residues MMLDLRFSTDYYLRVLELAIRDESRILVYNKKHHLLETWPIHTVLSPDQDAMKETIQKVIQELFSRSVISYALSGRLLSI IDMRLRQELPYTRILYKIFRKDTFTRKTSVIQKLLKLKNIIFLERQRPLNKVSNVASSVFAKEKTNFSSWEDFTHDVEIH AESADAHLSVKEIITAESSSQVIMEALMTFLESQAMYLPLSLELLDQFVAEKAIPLQTLSEKSFALLSELKNLYTLSRED FQAVIGGVITNSLSAMLTNSLVGSLLFTPQGKAMVNTWQEVAEFSPKEANAAQGFLAEILRRIISEDLKTAAAIVNEATP EQIGRMYSIRDYSPGLWLKMLQMLLMRWLLDFDEKVYSLLKKSINYYTPEPSFWQQILCIFKKF >Mature_384_residues MMLDLRFSTDYYLRVLELAIRDESRILVYNKKHHLLETWPIHTVLSPDQDAMKETIQKVIQELFSRSVISYALSGRLLSI IDMRLRQELPYTRILYKIFRKDTFTRKTSVIQKLLKLKNIIFLERQRPLNKVSNVASSVFAKEKTNFSSWEDFTHDVEIH AESADAHLSVKEIITAESSSQVIMEALMTFLESQAMYLPLSLELLDQFVAEKAIPLQTLSEKSFALLSELKNLYTLSRED FQAVIGGVITNSLSAMLTNSLVGSLLFTPQGKAMVNTWQEVAEFSPKEANAAQGFLAEILRRIISEDLKTAAAIVNEATP EQIGRMYSIRDYSPGLWLKMLQMLLMRWLLDFDEKVYSLLKKSINYYTPEPSFWQQILCIFKKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0675/CT_696/TC_0068 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44349; Mature: 44349
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLDLRFSTDYYLRVLELAIRDESRILVYNKKHHLLETWPIHTVLSPDQDAMKETIQKVI CEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEECCCCHHHHHHHHHHHH QELFSRSVISYALSGRLLSIIDMRLRQELPYTRILYKIFRKDTFTRKTSVIQKLLKLKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLERQRPLNKVSNVASSVFAKEKTNFSSWEDFTHDVEIHAESADAHLSVKEIITAESSS HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCH QVIMEALMTFLESQAMYLPLSLELLDQFVAEKAIPLQTLSEKSFALLSELKNLYTLSRED HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FQAVIGGVITNSLSAMLTNSLVGSLLFTPQGKAMVNTWQEVAEFSPKEANAAQGFLAEIL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RRIISEDLKTAAAIVNEATPEQIGRMYSIRDYSPGLWLKMLQMLLMRWLLDFDEKVYSLL HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKSINYYTPEPSFWQQILCIFKKF HHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MMLDLRFSTDYYLRVLELAIRDESRILVYNKKHHLLETWPIHTVLSPDQDAMKETIQKVI CEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEECCCCHHHHHHHHHHHH QELFSRSVISYALSGRLLSIIDMRLRQELPYTRILYKIFRKDTFTRKTSVIQKLLKLKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLERQRPLNKVSNVASSVFAKEKTNFSSWEDFTHDVEIHAESADAHLSVKEIITAESSS HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCH QVIMEALMTFLESQAMYLPLSLELLDQFVAEKAIPLQTLSEKSFALLSELKNLYTLSRED HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FQAVIGGVITNSLSAMLTNSLVGSLLFTPQGKAMVNTWQEVAEFSPKEANAAQGFLAEIL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH RRIISEDLKTAAAIVNEATPEQIGRMYSIRDYSPGLWLKMLQMLLMRWLLDFDEKVYSLL HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKSINYYTPEPSFWQQILCIFKKF HHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]