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The map label for this gene is fliN [C]

Identifier: 62184686

GI number: 62184686

Start: 46764

End: 47879

Strand: Direct

Name: fliN [C]

Synonym: CAB039

Alternate gene names: 62184686

Gene position: 46764-47879 (Clockwise)

Preceding gene: 62184685

Following gene: 62184687

Centisome position: 4.09

GC content: 42.56

Gene sequence:

>1116_bases
ATGACAGTAGCAGCGGAACCTAGTGCTAGTTGGTTAAAATCTAGACAGGATTTTCTAAGTTCTTTAGTGAAAACGGAAGA
GGCGGTTGCTCTTCCTCCGTTCCCTAAAGAACTTTGCCAAAATAGGTTGAAAGAAAAATTCCGTTTAGAAGATACGAATC
TTACTATTCAACCTCGAGGTTCCCTAACTGCTGCTCAGGCTGTTCAAGATTTTGGGACACACTTTTTAGTACAGTCTTTC
TTGGCCCAGCCCCTGACATCAGGGACGTTTTTCTTTGTCACCTCCGAAGCTGATCTGCAGTCGTTCATGGTGTCCGTGTT
CAATGATTCTAGTTTAGCTTCCTACTTTTATGAGAAAGATAAGCTTTTAGGTTTCCATTACTATTTTTCTGCAGAGCTGT
GTAAGTTGCTCCAGGAGCTCGCTTGGATACCTTCTTTATCTGTTAGAGTTGTCGGCGACGCTCGATTTTCTACTAAAGAC
CTACAAGGCTCGTATCAGGCTGTAGATGTCAATTGCGGATTAGACGGAAAAACTATGCGTTTTCGTTTACTTTTCCCAGA
AGCAACCTGTGCCAGCTGTCAGGATTTCCTTTCAGCCTCGAATCAGAATTTTGATATTCATCAGTTAGATCCTACGCCTT
TAACTATGTCTGTAGAAATTGGCTATTGCCAATTAACTCAGGAAGAATGGCAACAAGTTGCGCATGGCAGCTTTATCTTG
TTAGATAGTTGTTTGTATGATCCTGATACAGAAGAAAGCGGAGGCTTGCTAACTGTCCAAGGACATCAGTTCTTTGGTGG
TCGTTTTATTGATCAAACATCTGGAGAATTTAAAATTACTAGCTATCCAAGTGTGCCTCAGGAAGCCCCTACCGAAGAAA
CTCCGGAAGCCTTGCCTGCAGCACCTTTACCAGGCAACTATAAGTTAGTCGCAGAAGCTTCTCGATACTCGTTGACTGTG
GAAGAGTTTTTACATCTCTCTCAAGGCAGCATTCTGAATCTCAATGGGATCCACCCTTCTCGAGGCGTGGATTTAATCCT
CAACGGTGCAAAAGTTGGAAGAGGAGAAATTGTATCTTTAGGAGATGTTTTAGGAATTCGAGTTCTAGAAGTCTAA

Upstream 100 bases:

>100_bases
AGATGAAGAGAGGGATCAACAAGGAAAAGATCAGCAGCAGCAAGATCAAGAACAAAACCAATATAAAGTTGAAGAAGCAC
GTTTATAAAGGTGATTTCTC

Downstream 100 bases:

>100_bases
ACGTATAATTGTTTCGTATGGATTGTCAATCCGAAATACTTCTTCTGCATCAGGTAATAGGTGCTTACCACATCAAGAAA
ATCCTGAGTAAGAAAGAAGG

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLEDTNLTIQPRGSLTAAQAVQDFGTHFLVQSF
LAQPLTSGTFFFVTSEADLQSFMVSVFNDSSLASYFYEKDKLLGFHYYFSAELCKLLQELAWIPSLSVRVVGDARFSTKD
LQGSYQAVDVNCGLDGKTMRFRLLFPEATCASCQDFLSASNQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFIL
LDSCLYDPDTEESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPAAPLPGNYKLVAEASRYSLTV
EEFLHLSQGSILNLNGIHPSRGVDLILNGAKVGRGEIVSLGDVLGIRVLEV

Sequences:

>Translated_371_residues
MTVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLEDTNLTIQPRGSLTAAQAVQDFGTHFLVQSF
LAQPLTSGTFFFVTSEADLQSFMVSVFNDSSLASYFYEKDKLLGFHYYFSAELCKLLQELAWIPSLSVRVVGDARFSTKD
LQGSYQAVDVNCGLDGKTMRFRLLFPEATCASCQDFLSASNQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFIL
LDSCLYDPDTEESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPAAPLPGNYKLVAEASRYSLTV
EEFLHLSQGSILNLNGIHPSRGVDLILNGAKVGRGEIVSLGDVLGIRVLEV
>Mature_370_residues
TVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLEDTNLTIQPRGSLTAAQAVQDFGTHFLVQSFL
AQPLTSGTFFFVTSEADLQSFMVSVFNDSSLASYFYEKDKLLGFHYYFSAELCKLLQELAWIPSLSVRVVGDARFSTKDL
QGSYQAVDVNCGLDGKTMRFRLLFPEATCASCQDFLSASNQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFILL
DSCLYDPDTEESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPAAPLPGNYKLVAEASRYSLTVE
EFLHLSQGSILNLNGIHPSRGVDLILNGAKVGRGEIVSLGDVLGIRVLEV

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40970; Mature: 40838

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLEDTNLTIQPRG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHEECCCCEEEECCC
SLTAAQAVQDFGTHFLVQSFLAQPLTSGTFFFVTSEADLQSFMVSVFNDSSLASYFYEKD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHC
KLLGFHYYFSAELCKLLQELAWIPSLSVRVVGDARFSTKDLQGSYQAVDVNCGLDGKTMR
CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCEEEEEEECCCCCCEEE
FRLLFPEATCASCQDFLSASNQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFIL
EEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEECHHHHHHHHCCCEEE
LDSCLYDPDTEESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPA
EEECCCCCCCCCCCCEEEEECCEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
APLPGNYKLVAEASRYSLTVEEFLHLSQGSILNLNGIHPSRGVDLILNGAKVGRGEIVSL
CCCCCCEEEEEECCHHEEEHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEE
GDVLGIRVLEV
CHHHCEEEECC
>Mature Secondary Structure 
TVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLEDTNLTIQPRG
CCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHEECCCCEEEECCC
SLTAAQAVQDFGTHFLVQSFLAQPLTSGTFFFVTSEADLQSFMVSVFNDSSLASYFYEKD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHC
KLLGFHYYFSAELCKLLQELAWIPSLSVRVVGDARFSTKDLQGSYQAVDVNCGLDGKTMR
CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCEEEEEEECCCCCCEEE
FRLLFPEATCASCQDFLSASNQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFIL
EEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEECHHHHHHHHCCCEEE
LDSCLYDPDTEESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPA
EEECCCCCCCCCCCCEEEEECCEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
APLPGNYKLVAEASRYSLTVEEFLHLSQGSILNLNGIHPSRGVDLILNGAKVGRGEIVSL
CCCCCCEEEEEECCHHEEEHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEE
GDVLGIRVLEV
CHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA