The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572815

Identifier: 28572815

GI number: 28572815

Start: 765382

End: 766143

Strand: Reverse

Name: 28572815

Synonym: TW674

Alternate gene names: NA

Gene position: 766143-765382 (Counterclockwise)

Preceding gene: 28572816

Following gene: 28572814

Centisome position: 82.74

GC content: 43.04

Gene sequence:

>762_bases
ATGCCTAAGACAACAACATCTGTAACACAACCCAGACAATCATCCTTCTTTCCCCTCCTAACAGGTTTCTTCACCTATCT
CTTTCTCCTTACAAGACCACATAAGAGAAGACTGTTCATGGCAGGATTAGTTAGGAAATACAATAATCCGCCATGGGGTG
TTCATTTCGTCTCGTATGTGCTTACCGCCATACCTGTGATTTTATTTATCATGTCTCTTACATACCTCTTCTCGTTACTT
GGTGTGGATCGGGGCTATTACATGACAAGCGCTTCAAGCGGCGGCTCGTTATTTTTCTTAATTTTCGTGCTCTTTTTCTA
TCAGTTAGTAGTCTTTCCATACCTGGATCGCACAAAACGATCCTTCTTCCTCCGCTACTCCTATTACTCACAAACCCCAT
CTTTCCAAAACCCAACCAAACGCAGACAAATCCTCCTGCTTGACGTGCAACAAAAAGGCACTCGCTGGACCTCTGATGAT
GTTTTGAATTTTATTGCCTCGCTTGCTGTGTTTCTATTTATCTGGCTATTGCTCTTGCCGGACTCTCCTGGACTGCCGCT
CTTTTATACCCAGAGCCTGCTCCTCTTAGCCTCTATCGCCGCTGTCTACTACCTTTGGCTATTTGGTTACAATTCTCCCC
CTATCCGCAAACTCCTCTATAACCTACATATAAGAAGACATGGACCAATACCAAAGGAACTAACAGATATAGTTACCCAA
GCCTATGAGATATATCCAGAACAGATAAAGGGTAATAAATAA

Upstream 100 bases:

>100_bases
ACATGCTGTCTTGGCCCTGCCCTCCCTTCCAACCCCGCTACATCCGCTTTGATCCCTTCAGAACCAAGTGTGGCTAATCT
GTAACAGATAAGGAGATAAA

Downstream 100 bases:

>100_bases
AACAAGGACATATGCCGCTCTAGGGTATTGGCCGCCGCCGTGATTGTTGTTTTGCACTCTGTTTGCGCCTCGTAGACGCT
GACAGTTTATGGACGGATCT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPKTTTSVTQPRQSSFFPLLTGFFTYLFLLTRPHKRRLFMAGLVRKYNNPPWGVHFVSYVLTAIPVILFIMSLTYLFSLL
GVDRGYYMTSASSGGSLFFLIFVLFFYQLVVFPYLDRTKRSFFLRYSYYSQTPSFQNPTKRRQILLLDVQQKGTRWTSDD
VLNFIASLAVFLFIWLLLLPDSPGLPLFYTQSLLLLASIAAVYYLWLFGYNSPPIRKLLYNLHIRRHGPIPKELTDIVTQ
AYEIYPEQIKGNK

Sequences:

>Translated_253_residues
MPKTTTSVTQPRQSSFFPLLTGFFTYLFLLTRPHKRRLFMAGLVRKYNNPPWGVHFVSYVLTAIPVILFIMSLTYLFSLL
GVDRGYYMTSASSGGSLFFLIFVLFFYQLVVFPYLDRTKRSFFLRYSYYSQTPSFQNPTKRRQILLLDVQQKGTRWTSDD
VLNFIASLAVFLFIWLLLLPDSPGLPLFYTQSLLLLASIAAVYYLWLFGYNSPPIRKLLYNLHIRRHGPIPKELTDIVTQ
AYEIYPEQIKGNK
>Mature_252_residues
PKTTTSVTQPRQSSFFPLLTGFFTYLFLLTRPHKRRLFMAGLVRKYNNPPWGVHFVSYVLTAIPVILFIMSLTYLFSLLG
VDRGYYMTSASSGGSLFFLIFVLFFYQLVVFPYLDRTKRSFFLRYSYYSQTPSFQNPTKRRQILLLDVQQKGTRWTSDDV
LNFIASLAVFLFIWLLLLPDSPGLPLFYTQSLLLLASIAAVYYLWLFGYNSPPIRKLLYNLHIRRHGPIPKELTDIVTQA
YEIYPEQIKGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29529; Mature: 29398

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCC
>Mature Secondary Structure 
PKTTTSVTQPRQSSFFPLLTGFFTYLFLLTRPHKRRLFMAGLVRKYNNPPWGVHFVSYV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
LTAIPVILFIMSLTYLFSLLGVDRGYYMTSASSGGSLFFLIFVLFFYQLVVFPYLDRTKR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SFFLRYSYYSQTPSFQNPTKRRQILLLDVQQKGTRWTSDDVLNFIASLAVFLFIWLLLLP
HHEEEEHHHCCCCCCCCCHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DSPGLPLFYTQSLLLLASIAAVYYLWLFGYNSPPIRKLLYNLHIRRHGPIPKELTDIVTQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
AYEIYPEQIKGNK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA