Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572769

Identifier: 28572769

GI number: 28572769

Start: 709006

End: 709233

Strand: Reverse

Name: 28572769

Synonym: TW623

Alternate gene names: NA

Gene position: 709233-709006 (Counterclockwise)

Preceding gene: 28572770

Following gene: 28572768

Centisome position: 76.6

GC content: 46.93

Gene sequence:

>228_bases
TTGGGCGACATAGTTGGCAACCTATTCAATGCCGCAGGCAATGGTCTAGGCGGTATCGTAGGCGGACTCCTGGGTAGATC
ACCATCTCTATCTGCCACAGAGTTACATGTAACACATAGGCATTGGCACAACCATAACCATATACACAACAACACCTGTC
AGCTTATCTGTAACAGGTTTTATAACCGGTTACACAATAAGCCCAACCACCCCAACCACAGACAGTAA

Upstream 100 bases:

>100_bases
AAACTCAACCACCCTAACCTGCTGCAGCAAAACCTGCTCCTGCTAAACTTGCGCAACCCGCTGCTACTGAGCTGCCCCCA
CACAATCATCCGGAGGCCTC

Downstream 100 bases:

>100_bases
CACCGTAACCATCAATATTGATACCAGTAACCCTTGATTCCTCTGGAACCATAACAGGAAGTATAGATACGAGTGTTACA
CCTGGAAAATATGTTGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ

Sequences:

>Translated_75_residues
MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ
>Mature_74_residues
GDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8388; Mature: 8256

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRF
CCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHH
YNRLHNKPNHPNHRQ
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
GDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRF
CCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHH
YNRLHNKPNHPNHRQ
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA