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The map label for this gene is qcrB [H]

Identifier: 28572670

GI number: 28572670

Start: 560351

End: 561961

Strand: Reverse

Name: qcrB [H]

Synonym: TW521

Alternate gene names: 28572670

Gene position: 561961-560351 (Counterclockwise)

Preceding gene: 28572671

Following gene: 28572669

Centisome position: 60.69

GC content: 44.94

Gene sequence:

>1611_bases
ATGTTTGGGGTAAAATCTCGGGACAAAAAAGTGCGTGAGGGCAGGTCAACTATTGTTGATAGGCTGAGTGTTTATATTGA
TGATCGAACATCATTGGCTTTTGTTATACGCAAGTTCGCGAGAAAAATATTTCCGGACCACTGGAGTTTCCTTCTTGGCG
AAGTTGCCCTATACAGTTTTGTTGTTATTTTCATAAGCGGGGTTTTTCTAACCTTTTTTTTTCAGGCCTCTCAGGCCCCC
ATTCACTATCAGGGTAGTTATGCTCCCCTGAAGGGCGTTGAGATGTCTGCAGCTATGGAGTCCACCCTTCGGATTAGTTT
TGATATTCGTGCGGGCCTCTTGATAAGGCAGATTCATCACTGGGCGGCTCTTACTTTTGTGGCTTCCATTGGTCTGCACA
TGCTTCGTGTGTTTTTTACGGGTGCCTTTAGAAAGCCCAGGGAGATTAACTGGGTTATCGGTTTTCTGTTATTTATTCTT
GCCATGGCAGAGGGTTTTACGGGCTATTCTCTCCCGGATGATCTATTGTCAGGTAACGGCCTTCGCATTATTGATGGCAT
GTTGCTCGGTATACCATTTGTTGGCACATGGCTTTCTTTCCTCTTGTTCGGTGGTGAGTTTCCCGGCACGCAAATAATTG
GTCGCTTGTATACCATGCACATTCTCCTTTTGCCGATTATTCTAATAGCCCTAATTGCGCTTCATCTTGTTCTTGTTGTT
GTGCATAAACATACTCAATATCCCGGCGCAGGCAGAAATGCAAGGAATGTTGTTGGATATCCAGTGTTACCTGTTTACGC
GGCAAAAGCTGGCGGGTTTTTCTTTATTGTGTTCGGCTTAATTGTGCTTACTGCCTCTTTATTCACGATAAACCCAATAT
GGAATTATGGACCGTATGATCCATCCCCTGTCTCGGCCGGAACGCAGCCCGACTGGTATATAGGGTTTGCCGATGGCGCA
TTGAGGCTTGTTCCTTCAGGATGGGAGGTGGTTGTTTTCGGTCTTACCCTTTCCTTCAACGTTCTTATTCCGGTGTTTGT
TATGTTGCTTTTTTTGTTTGCGGTTGCCATTTATCCATTTTTCGAGGCGTGGATTACGGGGGATACTCGCGAACATCACA
TTTTAGATCGCCCAAGGAATGCACCCACGCGCACTGCAATTGGTGCTGCTGGTGTTGTCTTCTATACGGTCTTGTGGGCT
GCCGCTGGGTCGGATATTATTGCGACTCATTTTCAAATGGGAATTGAGATCATAATAATAATTCTCAGAGTACTTCTTAT
TATTGGTCCTGTTGTCGCTTTTATCTTAACCAAGCGCTTGTGTCTTGCTTTGCAAAGAAAGGATAGGAGTATTGTGCTGC
ATGGTCAGGAATCTGGCCGTATAGTTCGTTTACCGGGTGGGGAATTTGTTGAGGTGGAAACTGCGATAAACGAGTATGAT
CGATGGCGTCTTGTTAGTTATGACACCTATAAGCCATTAGCTCTTCTTCCGCGTAAGAATGGGAAAATCTATTTTAGAGA
CAGGGTGCGTGCATTTTTATCACGTTGGTTTTTTGAGGATCGAATAGTCCCCGTAGCTCCCGATGATATCGTGCACACAT
CAGATCATTGA

Upstream 100 bases:

>100_bases
TACCCCAGCTGCCAATAACGGTTGATTCCGAAGGTTATCTGATTGCACAGAGTGATTTTAAAGAGCCTGTTGGGCCGAGC
TTCTGGGAGAGATCGCTCTG

Downstream 100 bases:

>100_bases
TCTTTTGTTCTTGATATAATCCCTATATAACCCTCGTCAGTCCGTTTGGGGAAGCGTTGTACTGATGGGAGTTTCTGTGG
TATTACCTGTTTCCGGGTAT

Product: ubiquinol-cytochrome C reductase cytochrome B subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MFGVKSRDKKVREGRSTIVDRLSVYIDDRTSLAFVIRKFARKIFPDHWSFLLGEVALYSFVVIFISGVFLTFFFQASQAP
IHYQGSYAPLKGVEMSAAMESTLRISFDIRAGLLIRQIHHWAALTFVASIGLHMLRVFFTGAFRKPREINWVIGFLLFIL
AMAEGFTGYSLPDDLLSGNGLRIIDGMLLGIPFVGTWLSFLLFGGEFPGTQIIGRLYTMHILLLPIILIALIALHLVLVV
VHKHTQYPGAGRNARNVVGYPVLPVYAAKAGGFFFIVFGLIVLTASLFTINPIWNYGPYDPSPVSAGTQPDWYIGFADGA
LRLVPSGWEVVVFGLTLSFNVLIPVFVMLLFLFAVAIYPFFEAWITGDTREHHILDRPRNAPTRTAIGAAGVVFYTVLWA
AAGSDIIATHFQMGIEIIIIILRVLLIIGPVVAFILTKRLCLALQRKDRSIVLHGQESGRIVRLPGGEFVEVETAINEYD
RWRLVSYDTYKPLALLPRKNGKIYFRDRVRAFLSRWFFEDRIVPVAPDDIVHTSDH

Sequences:

>Translated_536_residues
MFGVKSRDKKVREGRSTIVDRLSVYIDDRTSLAFVIRKFARKIFPDHWSFLLGEVALYSFVVIFISGVFLTFFFQASQAP
IHYQGSYAPLKGVEMSAAMESTLRISFDIRAGLLIRQIHHWAALTFVASIGLHMLRVFFTGAFRKPREINWVIGFLLFIL
AMAEGFTGYSLPDDLLSGNGLRIIDGMLLGIPFVGTWLSFLLFGGEFPGTQIIGRLYTMHILLLPIILIALIALHLVLVV
VHKHTQYPGAGRNARNVVGYPVLPVYAAKAGGFFFIVFGLIVLTASLFTINPIWNYGPYDPSPVSAGTQPDWYIGFADGA
LRLVPSGWEVVVFGLTLSFNVLIPVFVMLLFLFAVAIYPFFEAWITGDTREHHILDRPRNAPTRTAIGAAGVVFYTVLWA
AAGSDIIATHFQMGIEIIIIILRVLLIIGPVVAFILTKRLCLALQRKDRSIVLHGQESGRIVRLPGGEFVEVETAINEYD
RWRLVSYDTYKPLALLPRKNGKIYFRDRVRAFLSRWFFEDRIVPVAPDDIVHTSDH
>Mature_536_residues
MFGVKSRDKKVREGRSTIVDRLSVYIDDRTSLAFVIRKFARKIFPDHWSFLLGEVALYSFVVIFISGVFLTFFFQASQAP
IHYQGSYAPLKGVEMSAAMESTLRISFDIRAGLLIRQIHHWAALTFVASIGLHMLRVFFTGAFRKPREINWVIGFLLFIL
AMAEGFTGYSLPDDLLSGNGLRIIDGMLLGIPFVGTWLSFLLFGGEFPGTQIIGRLYTMHILLLPIILIALIALHLVLVV
VHKHTQYPGAGRNARNVVGYPVLPVYAAKAGGFFFIVFGLIVLTASLFTINPIWNYGPYDPSPVSAGTQPDWYIGFADGA
LRLVPSGWEVVVFGLTLSFNVLIPVFVMLLFLFAVAIYPFFEAWITGDTREHHILDRPRNAPTRTAIGAAGVVFYTVLWA
AAGSDIIATHFQMGIEIIIIILRVLLIIGPVVAFILTKRLCLALQRKDRSIVLHGQESGRIVRLPGGEFVEVETAINEYD
RWRLVSYDTYKPLALLPRKNGKIYFRDRVRAFLSRWFFEDRIVPVAPDDIVHTSDH

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=240, Percent_Identity=28.75, Blast_Score=79, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6226529, Length=244, Percent_Identity=25.8196721311475, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6226532, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 60229; Mature: 60229

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVKSRDKKVREGRSTIVDRLSVYIDDRTSLAFVIRKFARKIFPDHWSFLLGEVALYSF
CCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VVIFISGVFLTFFFQASQAPIHYQGSYAPLKGVEMSAAMESTLRISFDIRAGLLIRQIHH
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHHHHHH
WAALTFVASIGLHMLRVFFTGAFRKPREINWVIGFLLFILAMAEGFTGYSLPDDLLSGNG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
LRIIDGMLLGIPFVGTWLSFLLFGGEFPGTQIIGRLYTMHILLLPIILIALIALHLVLVV
CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHKHTQYPGAGRNARNVVGYPVLPVYAAKAGGFFFIVFGLIVLTASLFTINPIWNYGPYD
HHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCC
PSPVSAGTQPDWYIGFADGALRLVPSGWEVVVFGLTLSFNVLIPVFVMLLFLFAVAIYPF
CCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FEAWITGDTREHHILDRPRNAPTRTAIGAAGVVFYTVLWAAAGSDIIATHFQMGIEIIII
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ILRVLLIIGPVVAFILTKRLCLALQRKDRSIVLHGQESGRIVRLPGGEFVEVETAINEYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEHHHHCCCC
RWRLVSYDTYKPLALLPRKNGKIYFRDRVRAFLSRWFFEDRIVPVAPDDIVHTSDH
CEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGVKSRDKKVREGRSTIVDRLSVYIDDRTSLAFVIRKFARKIFPDHWSFLLGEVALYSF
CCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VVIFISGVFLTFFFQASQAPIHYQGSYAPLKGVEMSAAMESTLRISFDIRAGLLIRQIHH
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHHHHHH
WAALTFVASIGLHMLRVFFTGAFRKPREINWVIGFLLFILAMAEGFTGYSLPDDLLSGNG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
LRIIDGMLLGIPFVGTWLSFLLFGGEFPGTQIIGRLYTMHILLLPIILIALIALHLVLVV
CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHKHTQYPGAGRNARNVVGYPVLPVYAAKAGGFFFIVFGLIVLTASLFTINPIWNYGPYD
HHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCC
PSPVSAGTQPDWYIGFADGALRLVPSGWEVVVFGLTLSFNVLIPVFVMLLFLFAVAIYPF
CCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FEAWITGDTREHHILDRPRNAPTRTAIGAAGVVFYTVLWAAAGSDIIATHFQMGIEIIII
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ILRVLLIIGPVVAFILTKRLCLALQRKDRSIVLHGQESGRIVRLPGGEFVEVETAINEYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEHHHHCCCC
RWRLVSYDTYKPLALLPRKNGKIYFRDRVRAFLSRWFFEDRIVPVAPDDIVHTSDH
CEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA