| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is tatA
Identifier: 28572602
GI number: 28572602
Start: 490167
End: 490448
Strand: Reverse
Name: tatA
Synonym: TW452
Alternate gene names: 28572602
Gene position: 490448-490167 (Counterclockwise)
Preceding gene: 28572603
Following gene: 28572601
Centisome position: 52.97
GC content: 42.2
Gene sequence:
>282_bases ATGGGTAATGTTTTTAGCGGCTGGCATTTGCTTGTAATACTCTTGGTTATAGTGCTCTTGTTTGGAACTTCGAGGTTACC AAAGCTATCTAAAAGTGTTGTAGAGGCTTTGAAGATTTTCAGGCGGTCGTTTAATGAGGCTTCAGATATTACCCGATCGC AAGATGGGCATCCTGATTCTCAGGGAAACTTTGCTGAATCTGCTAGCTCTGTGCCTTTTGTGAAGTCGGAAAAACAATCA GAGAAACGTGCGAGTGTTACAGAAGCTAAGAAGAGCAAATAG
Upstream 100 bases:
>100_bases GCCCTTGGTTACGGCGATAAAGCGCAGGGTGATATTCCCGCAAACTCGACGCTTATTTTTGTTTTTGATATCCTCATGGC TACTTCCAGGAACTAAGTCG
Downstream 100 bases:
>100_bases TTTCAAAAGCATGACCCTGCTTGGGCATATTGCGGAGTTCAGATCGGTTTTGCTCATTTCCGGTCTTGCCATACTGCTTT GTTCGGTTATTGGGTGGATT
Product: sec-independent protein translocase protein TatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFNEASDITRSQDGHPDSQGNFAESASSVPFVKSEKQS EKRASVTEAKKSK
Sequences:
>Translated_93_residues MGNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFNEASDITRSQDGHPDSQGNFAESASSVPFVKSEKQS EKRASVTEAKKSK >Mature_92_residues GNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFNEASDITRSQDGHPDSQGNFAESASSVPFVKSEKQSE KRASVTEAKKSK
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_TROW8 (Q83NJ2)
Other databases:
- EMBL: BX251411 - RefSeq: NP_789382.1 - STRING: Q83NJ2 - GeneID: 1064293 - GenomeReviews: BX072543_GR - KEGG: tws:TW452 - BioCyc: TWHI218496:TW0427-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 10250; Mature: 10119
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc7de94c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFNEASDITRSQDGHPDS CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QGNFAESASSVPFVKSEKQSEKRASVTEAKKSK CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH >Mature Secondary Structure GNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFNEASDITRSQDGHPDS CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QGNFAESASSVPFVKSEKQSEKRASVTEAKKSK CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12606174