Click here to switch to the map view.

The map label for this gene is 28572598

Identifier: 28572598

GI number: 28572598

Start: 487545

End: 487586

Strand: Direct

Name: 28572598

Synonym: TW447

Alternate gene names: NA

Gene position: 487545-487586 (Clockwise)

Preceding gene: 28572597

Following gene: 28572599

Centisome position: 52.65

GC content: 52.38

Gene sequence:

>685_bases
ATGATTGGCGTTGCGCGTAAGCTGTTTCAAAATCCGTCGGGGGGGGGGGATATCCCGCATTAGCATGCCGGTTTGCCTTA
CCGGAGTTTCTGCCCTTCTTCTAGCCCTTGTCTTTATCACGCCCGCCTCTCACGCATATGCCGGTCGGGCCGCTGCCCAT
GTGTTTGCCACCCGAAACTATAACTGTTTGGGTACTTTTCTTTTTGCGTATCGCCAGCGCGGGAGCTCAGCACCTAAACC
GGTCTGTAGAGAGTTCTATCAGCGTAAACCCTCTAGCAAACCACCGGTGCCTCACAAGCCCGTGCCGGCCAAACCCTCTA
GCAAACCACCGGCACAACAGAGGCCACCGGTGCCTCATAATAACCCGCGGCCCTTACCTGCCAAACCGACTTCACAACCA
ACTTCCAAACCACAGCGGCCTTCGGTGCCAGTAGTGCACCCAGTGCCTCCCGCCGCACCAACTACATCACCAACTACATC
ACCAACTACATCACCAACTACATCACCAACTACATCACCAACTACAGTGACTGCTCCATCAGAACCTGCACCTACTACTG
ACACAACTAAGCAATTGTCCACTAGTAACGGGCGTGCTCGCTTACCATGGTGGGTGATGCTTGTCACTGGATTATCAGGT
CTATTTCTAGGCTCTGGACTGGTTGCCCTTCCCTTCCTCTTATAA

Upstream 100 bases:

>100_bases
CAATTCTTTGCAGCGGATGTATGGCAAATGACCGGAGTATGACGAATAACCAGGGTATGGCAAATGACCGGACAAATAAC
TGGAGTGAGTGGGTGCGAGA

Downstream 100 bases:

>100_bases
AGAGTACTTGCCTGTAAATTTCTACGCTTGTCTTATGACAATGCCCTGCAAGCGATGAATCCTGACCCAGCGGCCAGTAC
CCGCGGGGTAAATCAACAAA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 14; Mature: 14

Protein sequence:

>227_residues
MIGVARKLFQNPSGGGISRISMPVCLTGVSALLLALVFITPASHAYAGRAAAHVFATRNYNCLGTFLFAYRQRGSSAPKP
VCREFYQRKPSSKPPVPHKPVPAKPSSKPPAQQRPPVPHNNPRPLPAKPTSQPTSKPQRPSVPVVHPVPPAAPTTSPTTS
PTTSPTTSPTTSPTTVTAPSEPAPTTDTTKQLSTSNGRARLPWWVMLVTGLSGLFLGSGLVALPFLL

Sequences:

>Translated_14_residues
MIGVARKLFQNPSG
>Mature_14_residues
MIGVARKLFQNPSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 1518; Mature: 1518

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVARKLFQNPSG
CCCCHHHHHCCCCC
>Mature Secondary Structure
MIGVARKLFQNPSG
CCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA