The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

Click here to switch to the map view.

The map label for this gene is 28572572

Identifier: 28572572

GI number: 28572572

Start: 458872

End: 459096

Strand: Direct

Name: 28572572

Synonym: TW420

Alternate gene names: NA

Gene position: 458872-459096 (Clockwise)

Preceding gene: 28572571

Following gene: 28572573

Centisome position: 49.56

GC content: 44.89

Gene sequence:

>225_bases
TTGTCTGTAAAGACTGTCATAACGAGAAATCCGTGTCCTGAATCATCTGCAACAATGAAAATATTTCGAATTAGGATAGT
TCCAAGATTTGCCGAGGCGCCAACACCGGCAGAATATGTAATTGTTGTTGCCGCAGGGGTTAGAAGTGAACAGCCAGCCG
AAGCAAATGTGCAGATAACTAAGATGGCGACGCGCATAATCAGTCGGATCTTTAACGGCAGGTAG

Upstream 100 bases:

>100_bases
TATGGTAACTTTCACTTTTGGCCCGAAAACATTACTGCCCTCAGATAAGAAAAGTTCAACCTGTTTAGATGAGCTCGTCT
CAGCCGTTATCGTCTGCCTC

Downstream 100 bases:

>100_bases
AGAGACCGTGATACCCCTGGAGACATAGCACAATTCTAACGTACATGTTTTATTAGAGGGTACACAAAACGTATATGAGT
ACTGCTTGCTGCGTGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAAGVRSEQPAEANVQITKMATRIISRIFNGR

Sequences:

>Translated_74_residues
MSVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAAGVRSEQPAEANVQITKMATRIISRIFNGR
>Mature_73_residues
SVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAAGVRSEQPAEANVQITKMATRIISRIFNGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8188; Mature: 8057

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAAGVRSEQPAEANVQIT
CCCCEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEHH
KMATRIISRIFNGR
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAAGVRSEQPAEANVQIT
CCCEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEHH
KMATRIISRIFNGR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA