The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572479

Identifier: 28572479

GI number: 28572479

Start: 356139

End: 356681

Strand: Direct

Name: 28572479

Synonym: TW324

Alternate gene names: NA

Gene position: 356139-356681 (Clockwise)

Preceding gene: 28572478

Following gene: 28572481

Centisome position: 38.46

GC content: 46.04

Gene sequence:

>543_bases
GTGAGAAAATTCCTGTTTCGTCGGACCTCTCCCTTTGCGCTCGGATACGACAAACGGCAAGTTGACACGTTTTTTTCGGC
TGCTAAGGTTGCTTATGAAAACTCTGACCCGAAACTCCGGTCTTCACTTATTAGAAATATTACTTTCAAGCTGAGAAGGC
GCGGTTATTCTCCAAAGCAGGTTGATGCAGCTTTAGATCGTCTTGAACGGGCGTGTATTTTTAAAGAGCGACAGGCCTAT
GTTGCACTACATGGATCCCAGGCATGGAAAGAGCATGTTGTATCCAGAATTCAACAGATTGCAGACCGTCTTCAAAAACC
GCCGAGAAAACGTTTTATCCGCGAAAATTGGGGGTACGAGCCTAATTCTGTTGATCGAGTGCTTGATCGAGTGCTTGGCT
ATTTACGTCGTACCGGCACCCTAAGTGAGGATGAAGTCCGCTCTGCGGTCTTTCGACCCTCGTACAGGGGGTACAAAACA
GGTCATGTTGATGCGTATCTCGATGAAGTTAGATTGATTATCATCATGCTTGAATGGAGATAA

Upstream 100 bases:

>100_bases
TTTTGGCCTTACTCCCAGTGATCACGCCCCACTGGTGTCGGTTATTGATCCCCCTAGGCGGACATTTCGCAGAGACGACT
GAACCTACCTGATTTTTGCA

Downstream 100 bases:

>100_bases
GCTGCGCCTAATCTTTATGGGCAGTGAATGAATATCCAGACCAGATGATCATGCGTCATATTTGCGCTTCGGATGACTAA
TTACGCCCGTTTTATTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: DivIVA Domain Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily II

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIRNITFKLRRRGYSPKQVDAALDRLERACIFKERQAY
VALHGSQAWKEHVVSRIQQIADRLQKPPRKRFIRENWGYEPNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKT
GHVDAYLDEVRLIIIMLEWR

Sequences:

>Translated_180_residues
MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIRNITFKLRRRGYSPKQVDAALDRLERACIFKERQAY
VALHGSQAWKEHVVSRIQQIADRLQKPPRKRFIRENWGYEPNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKT
GHVDAYLDEVRLIIIMLEWR
>Mature_180_residues
MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIRNITFKLRRRGYSPKQVDAALDRLERACIFKERQAY
VALHGSQAWKEHVVSRIQQIADRLQKPPRKRFIRENWGYEPNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKT
GHVDAYLDEVRLIIIMLEWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21358; Mature: 21358

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIRNITFKLRRRGYSPKQ
CCCCHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH
VDAALDRLERACIFKERQAYVALHGSQAWKEHVVSRIQQIADRLQKPPRKRFIRENWGYE
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKTGHVDAYLDEVRLIIIMLEWR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECC
>Mature Secondary Structure
MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIRNITFKLRRRGYSPKQ
CCCCHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH
VDAALDRLERACIFKERQAYVALHGSQAWKEHVVSRIQQIADRLQKPPRKRFIRENWGYE
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKTGHVDAYLDEVRLIIIMLEWR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA