The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572345

Identifier: 28572345

GI number: 28572345

Start: 224723

End: 225307

Strand: Direct

Name: 28572345

Synonym: TW184

Alternate gene names: NA

Gene position: 224723-225307 (Clockwise)

Preceding gene: 28572344

Following gene: 28572346

Centisome position: 24.27

GC content: 43.59

Gene sequence:

>585_bases
ATGACAAAACCCGTGGCATACTCTATCTATGCACTTATCGTTATCCTGACTGGTATTGGTCTGGGTATTATTGGACTTCC
CTTTGCCACCCTTGCGTTTATCGCGATTTTCGTCTCGACTCCTGCTTTGTTTAGAGCTGATATCAGAGAGTTACGGCTTC
CCAATGCAATTACGCTTCCGCTTATCGCAATTGGCATTGTGGCGTTACTTGCGGATCAGATTGTTCACCCCAATTTGGAT
ATTGTCTTTTCTGCTCTTATCGCAATTGGCCTATCCTCATTCCTTTTTATTGTGTCTATTTTTGGCGGTATGGGAATGGG
GGATGTAAAGTTATCGCTTGCCCTGCTCTTGTGTGCGGCGAATCTGGGCCCTGCCTTCCCTATAATTGCAATCTCTAGTG
CCTTCCTTGTGGCATTCTGTTTCTGCATCCTGATATTTGTAGGTCTCTTTAGATTCTTTAAAAATAGTGGGAGAATTAGC
TGTTTGCCGTTTGGGCCATTTTTATTGCTTGGATTCTGGACAACTGTTATTGTGTGGGGTATAGACAGATGGACAGATGT
GGATATCCTCAGAATTATTTGGTGA

Upstream 100 bases:

>100_bases
TTCTTCCGTGAAGGTTTACCAAATCACTTCTTGTGTCACTAACTAAGACGTTTGTTGAAAACCTGTTTTAGTATTCTCCG
CGCGGTGTAGTGTAAAGCCC

Downstream 100 bases:

>100_bases
CAGTTTCTGCGGCACTGCCTTTGCCCGGATACCTGCTACGACAGCACTGAAAAGCTGACAAATAGGTCTCCTTGGTTACA
TTCCTTTTTGTCTTTTATTT

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTKPVAYSIYALIVILTGIGLGIIGLPFATLAFIAIFVSTPALFRADIRELRLPNAITLPLIAIGIVALLADQIVHPNLD
IVFSALIAIGLSSFLFIVSIFGGMGMGDVKLSLALLLCAANLGPAFPIIAISSAFLVAFCFCILIFVGLFRFFKNSGRIS
CLPFGPFLLLGFWTTVIVWGIDRWTDVDILRIIW

Sequences:

>Translated_194_residues
MTKPVAYSIYALIVILTGIGLGIIGLPFATLAFIAIFVSTPALFRADIRELRLPNAITLPLIAIGIVALLADQIVHPNLD
IVFSALIAIGLSSFLFIVSIFGGMGMGDVKLSLALLLCAANLGPAFPIIAISSAFLVAFCFCILIFVGLFRFFKNSGRIS
CLPFGPFLLLGFWTTVIVWGIDRWTDVDILRIIW
>Mature_193_residues
TKPVAYSIYALIVILTGIGLGIIGLPFATLAFIAIFVSTPALFRADIRELRLPNAITLPLIAIGIVALLADQIVHPNLDI
VFSALIAIGLSSFLFIVSIFGGMGMGDVKLSLALLLCAANLGPAFPIIAISSAFLVAFCFCILIFVGLFRFFKNSGRISC
LPFGPFLLLGFWTTVIVWGIDRWTDVDILRIIW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20977; Mature: 20846

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPVAYSIYALIVILTGIGLGIIGLPFATLAFIAIFVSTPALFRADIRELRLPNAITLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH
LIAIGIVALLADQIVHPNLDIVFSALIAIGLSSFLFIVSIFGGMGMGDVKLSLALLLCAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NLGPAFPIIAISSAFLVAFCFCILIFVGLFRFFKNSGRISCLPFGPFLLLGFWTTVIVWG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHC
IDRWTDVDILRIIW
CCCCCCHHHHHHCC
>Mature Secondary Structure 
TKPVAYSIYALIVILTGIGLGIIGLPFATLAFIAIFVSTPALFRADIRELRLPNAITLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH
LIAIGIVALLADQIVHPNLDIVFSALIAIGLSSFLFIVSIFGGMGMGDVKLSLALLLCAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NLGPAFPIIAISSAFLVAFCFCILIFVGLFRFFKNSGRISCLPFGPFLLLGFWTTVIVWG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHC
IDRWTDVDILRIIW
CCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA