| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is folP [H]
Identifier: 28572337
GI number: 28572337
Start: 216584
End: 218881
Strand: Direct
Name: folP [H]
Synonym: TW175
Alternate gene names: 28572337
Gene position: 216584-218881 (Clockwise)
Preceding gene: 28572336
Following gene: 28572338
Centisome position: 23.39
GC content: 46.21
Gene sequence:
>2298_bases GTGATGAACATGAGCTATACTCCCGACCCATTTCCACCTCCTAATGTAATGGGCATTCTGAATATAACCGATGATTCTTT CAGTGATGGTGGACTGTTTTTAGACCCCTCTGCTGCCATTACCCAAGGTAGAAAGTTATTTGCTGAGGGTGCTTCAATAA TCGATGTTGGGGGTGAATCGACACGCCCGGGTGCTGAGCGGATTAGCGTGGAAGAAGAAAAAAAAAGGGTTTTACCCGTA GTTAGGGAACTTCTATCCGAAGGTATTCATGTAAGTCTTGACACCATGAATGCAGACACAGCAAAAGAGGGCCTTAGCAT GGGTGTTGCCATTATAAATGACGTATCAGCGGGCAAAGCCGACCCGGACATGCTAAGAGTGATAGCCGATGCAGGCTGTA AATACATCGCGATGCATTGGCGTGGGCACTCCATGTTTATGGATAGCCTTGCTCATTACGACGATGTTGTGAGTGATGTT CTTCGAGAGCTTAAGTTTGATATCGAGCGTATTACTGCCGCTGGGGTAAAGAGCGACCAGATCATCCTTGATCCTGGTTT TGGCTTTTCTAAAACAAGTGACCATAATTGGCAGTTGTTCAGAAACCTTGATTGCTTTGTTAAGCTGGGCTTTCCCGTGC TGATTGGTCTTTCGCGCAAGAGGTTTTTGAGTCGAGTATTTAAGGGGCATGATTTTTCTCCTAAAGATTCTAAGAATGTT GGAGGGTTGGATAACCGCGAAATACTTGCGCGCGATCTGCCAAGCGGGATACTGAGTGCTATTGCCATAACACGTGGAGC ATGGGGCGTGCGTGTACATGATGTTGCCTCAGCTCACACGGCGCTGCGGACTCTACAGCTTGCGCAATACGGCTCGGTAT ATCAGGCCCACAAACGGGCGGCAAATACCGGAATAGACACCGCAATACCCGGCCAAGGCAACACTGATGACACCACTGCC TCCAGTAACCACACCAACAATTCTGAAACAGGAGCTTCTTTAAAAAGTGGCGTGAGTCAAGTCCGCAACATGATTGCCCC GCCCGTTATAAAGATAAGAAGTCTGCGCGTGTATGCATATCATGGGGTGTATCGTTCTGAGCGGGACTACGGTCAGCAAT TCATTATCGATGCAGATATTCAATTAAAACATTTTCCAGAAGACAAGATTGACTCAACCCTAGACTATGACTCATTGACT GGAAAGTTTGTGCAATATGCCACCGCATCATCTGTGAATCTTATTGAGACACTCGCTGATCACCTTGCAAAGATTGCCGT CCTAGATCCAATGGTTGAGTGGGTAAGCCTCAGCATAACAAAGCCAAACCCTCCGCTCGCTTATATGAAACAAAGTAACA CAGCCGCCTGTCATGCTATGCATAAACCTGATACCAGAGGTGATTATGCTAAAGAACACACAAATCTTACAGGCCTTCAA TTATCGTGCACGGTTAGGAAAGTGCGTTCCGAAAGTGTAACAAGGGTCTATATAGGCATCGGTGCAAATGTAGGTAATTG CCTGGATAATGTCCAGCGCGCGATCAAGGATATTGCAGATCATCCAATGATTGAACTTGTCTCACTCGGCAGGCTTTTCC GAACCACCGCCGTTGTTGGCGAGAGTCTTGATGAATCTCTACCGGTATTTTTGAATACTGCAATCGCAATCGATACTGCT TTATCCATGCAGGATTTGCTTGCCTTAATGCTTTGTATAGAGAAAAAGCTTGGAAGAACTCGTCACAGTAGAACTCGTCA CAGTTTATCTTCCGCTCAAGACGCCCACCAGGCTGATTCAACTAGCGATAATCCTAACCAGTTACATTATCCTTGTGCCG GACGCCAAGGCATCCAACAGCCTTTACATTCGTCAACTTTGGCGCACACTCAGGATGGGTTTGTTAATCGGCATATTGAC CTTGATATCCTGCTCGCGGAGGGGGTTCAAATTACTGAACACGGGTTATGTATTCCACATCCAAGGCTCAGTAAGAGAGC CTTTGCGCTTTTGCCACTTGAGAGTATAGATCCTGATCTGCATATCCCCGGACATGGCCCAATTACTGACTTGATACATG GTCTTCCTGAGGATCAAATAAGCTCTGTTGCTACCCTTCGAGATTCCGGGTATGAATTATTCAGGCACTCTATTACCAGA CTAAACAATTGTTCAGCGCATAATAAAGCGTATGTTACTCCGTCAGCGGGCCAGAATTATGATTCTGAACAGGATTTTGA TGCTGGATTGTCACACACAGAATCACGCGGAAAAACAGAGCCACACGGAAAAATATGA
Upstream 100 bases:
>100_bases GACCTTCGCGCATCGGGGTATAGGAGATGCCGATATCATCTCTTTTATGACAATAATCCGGTAGCGTGTACCTGCTATTT CGCTTGGGTTAACGTGTATT
Downstream 100 bases:
>100_bases ATAAAACCGCAGCGCTCGTCGCGGCACTGATTGTTTTTAGTGCTGTAATCGCTGCCCTAGCAAGCCAGGTTCTTTCTGAA CTTGGATACAGTGTGTTTGT
Product: dihydropteroate synthase
Products: NA
Alternate protein names: DHPS 1; Dihydropteroate pyrophosphorylase 1 [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MMNMSYTPDPFPPPNVMGILNITDDSFSDGGLFLDPSAAITQGRKLFAEGASIIDVGGESTRPGAERISVEEEKKRVLPV VRELLSEGIHVSLDTMNADTAKEGLSMGVAIINDVSAGKADPDMLRVIADAGCKYIAMHWRGHSMFMDSLAHYDDVVSDV LRELKFDIERITAAGVKSDQIILDPGFGFSKTSDHNWQLFRNLDCFVKLGFPVLIGLSRKRFLSRVFKGHDFSPKDSKNV GGLDNREILARDLPSGILSAIAITRGAWGVRVHDVASAHTALRTLQLAQYGSVYQAHKRAANTGIDTAIPGQGNTDDTTA SSNHTNNSETGASLKSGVSQVRNMIAPPVIKIRSLRVYAYHGVYRSERDYGQQFIIDADIQLKHFPEDKIDSTLDYDSLT GKFVQYATASSVNLIETLADHLAKIAVLDPMVEWVSLSITKPNPPLAYMKQSNTAACHAMHKPDTRGDYAKEHTNLTGLQ LSCTVRKVRSESVTRVYIGIGANVGNCLDNVQRAIKDIADHPMIELVSLGRLFRTTAVVGESLDESLPVFLNTAIAIDTA LSMQDLLALMLCIEKKLGRTRHSRTRHSLSSAQDAHQADSTSDNPNQLHYPCAGRQGIQQPLHSSTLAHTQDGFVNRHID LDILLAEGVQITEHGLCIPHPRLSKRAFALLPLESIDPDLHIPGHGPITDLIHGLPEDQISSVATLRDSGYELFRHSITR LNNCSAHNKAYVTPSAGQNYDSEQDFDAGLSHTESRGKTEPHGKI
Sequences:
>Translated_765_residues MMNMSYTPDPFPPPNVMGILNITDDSFSDGGLFLDPSAAITQGRKLFAEGASIIDVGGESTRPGAERISVEEEKKRVLPV VRELLSEGIHVSLDTMNADTAKEGLSMGVAIINDVSAGKADPDMLRVIADAGCKYIAMHWRGHSMFMDSLAHYDDVVSDV LRELKFDIERITAAGVKSDQIILDPGFGFSKTSDHNWQLFRNLDCFVKLGFPVLIGLSRKRFLSRVFKGHDFSPKDSKNV GGLDNREILARDLPSGILSAIAITRGAWGVRVHDVASAHTALRTLQLAQYGSVYQAHKRAANTGIDTAIPGQGNTDDTTA SSNHTNNSETGASLKSGVSQVRNMIAPPVIKIRSLRVYAYHGVYRSERDYGQQFIIDADIQLKHFPEDKIDSTLDYDSLT GKFVQYATASSVNLIETLADHLAKIAVLDPMVEWVSLSITKPNPPLAYMKQSNTAACHAMHKPDTRGDYAKEHTNLTGLQ LSCTVRKVRSESVTRVYIGIGANVGNCLDNVQRAIKDIADHPMIELVSLGRLFRTTAVVGESLDESLPVFLNTAIAIDTA LSMQDLLALMLCIEKKLGRTRHSRTRHSLSSAQDAHQADSTSDNPNQLHYPCAGRQGIQQPLHSSTLAHTQDGFVNRHID LDILLAEGVQITEHGLCIPHPRLSKRAFALLPLESIDPDLHIPGHGPITDLIHGLPEDQISSVATLRDSGYELFRHSITR LNNCSAHNKAYVTPSAGQNYDSEQDFDAGLSHTESRGKTEPHGKI >Mature_765_residues MMNMSYTPDPFPPPNVMGILNITDDSFSDGGLFLDPSAAITQGRKLFAEGASIIDVGGESTRPGAERISVEEEKKRVLPV VRELLSEGIHVSLDTMNADTAKEGLSMGVAIINDVSAGKADPDMLRVIADAGCKYIAMHWRGHSMFMDSLAHYDDVVSDV LRELKFDIERITAAGVKSDQIILDPGFGFSKTSDHNWQLFRNLDCFVKLGFPVLIGLSRKRFLSRVFKGHDFSPKDSKNV GGLDNREILARDLPSGILSAIAITRGAWGVRVHDVASAHTALRTLQLAQYGSVYQAHKRAANTGIDTAIPGQGNTDDTTA SSNHTNNSETGASLKSGVSQVRNMIAPPVIKIRSLRVYAYHGVYRSERDYGQQFIIDADIQLKHFPEDKIDSTLDYDSLT GKFVQYATASSVNLIETLADHLAKIAVLDPMVEWVSLSITKPNPPLAYMKQSNTAACHAMHKPDTRGDYAKEHTNLTGLQ LSCTVRKVRSESVTRVYIGIGANVGNCLDNVQRAIKDIADHPMIELVSLGRLFRTTAVVGESLDESLPVFLNTAIAIDTA LSMQDLLALMLCIEKKLGRTRHSRTRHSLSSAQDAHQADSTSDNPNQLHYPCAGRQGIQQPLHSSTLAHTQDGFVNRHID LDILLAEGVQITEHGLCIPHPRLSKRAFALLPLESIDPDLHIPGHGPITDLIHGLPEDQISSVATLRDSGYELFRHSITR LNNCSAHNKAYVTPSAGQNYDSEQDFDAGLSHTESRGKTEPHGKI
Specific function: DHPS catalyzes the formation of the immediate precursor of folic acid. It is implicated in resistance to sulfonamide [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082224, Length=274, Percent_Identity=37.5912408759124, Blast_Score=174, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6324073, Length=328, Percent_Identity=33.5365853658537, Blast_Score=137, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006390 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: =2.5.1.15 [H]
Molecular weight: Translated: 83692; Mature: 83692
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS50972 PTERIN_BINDING ; PS00792 DHPS_1 ; PS00793 DHPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNMSYTPDPFPPPNVMGILNITDDSFSDGGLFLDPSAAITQGRKLFAEGASIIDVGGES CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEECCCCC TRPGAERISVEEEKKRVLPVVRELLSEGIHVSLDTMNADTAKEGLSMGVAIINDVSAGKA CCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCHHHEECCCCCCC DPDMLRVIADAGCKYIAMHWRGHSMFMDSLAHYDDVVSDVLRELKFDIERITAAGVKSDQ CHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IILDPGFGFSKTSDHNWQLFRNLDCFVKLGFPVLIGLSRKRFLSRVFKGHDFSPKDSKNV EEECCCCCCCCCCCCCHHHHHCCCEEEEECCHHEECCHHHHHHHHHHCCCCCCCCCCCCC GGLDNREILARDLPSGILSAIAITRGAWGVRVHDVASAHTALRTLQLAQYGSVYQAHKRA CCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANTGIDTAIPGQGNTDDTTASSNHTNNSETGASLKSGVSQVRNMIAPPVIKIRSLRVYAY HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE HGVYRSERDYGQQFIIDADIQLKHFPEDKIDSTLDYDSLTGKFVQYATASSVNLIETLAD ECCHHCCHHCCCEEEEECCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH HLAKIAVLDPMVEWVSLSITKPNPPLAYMKQSNTAACHAMHKPDTRGDYAKEHTNLTGLQ HHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCEE LSCTVRKVRSESVTRVYIGIGANVGNCLDNVQRAIKDIADHPMIELVSLGRLFRTTAVVG EEHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ESLDESLPVFLNTAIAIDTALSMQDLLALMLCIEKKLGRTRHSRTRHSLSSAQDAHQADS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSDNPNQLHYPCAGRQGIQQPLHSSTLAHTQDGFVNRHIDLDILLAEGVQITEHGLCIPH CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEECCCCCCCC PRLSKRAFALLPLESIDPDLHIPGHGPITDLIHGLPEDQISSVATLRDSGYELFRHSITR CCCCCCEEEEEEHHHCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LNNCSAHNKAYVTPSAGQNYDSEQDFDAGLSHTESRGKTEPHGKI HCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MMNMSYTPDPFPPPNVMGILNITDDSFSDGGLFLDPSAAITQGRKLFAEGASIIDVGGES CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEECCCCC TRPGAERISVEEEKKRVLPVVRELLSEGIHVSLDTMNADTAKEGLSMGVAIINDVSAGKA CCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCHHHEECCCCCCC DPDMLRVIADAGCKYIAMHWRGHSMFMDSLAHYDDVVSDVLRELKFDIERITAAGVKSDQ CHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IILDPGFGFSKTSDHNWQLFRNLDCFVKLGFPVLIGLSRKRFLSRVFKGHDFSPKDSKNV EEECCCCCCCCCCCCCHHHHHCCCEEEEECCHHEECCHHHHHHHHHHCCCCCCCCCCCCC GGLDNREILARDLPSGILSAIAITRGAWGVRVHDVASAHTALRTLQLAQYGSVYQAHKRA CCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANTGIDTAIPGQGNTDDTTASSNHTNNSETGASLKSGVSQVRNMIAPPVIKIRSLRVYAY HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE HGVYRSERDYGQQFIIDADIQLKHFPEDKIDSTLDYDSLTGKFVQYATASSVNLIETLAD ECCHHCCHHCCCEEEEECCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH HLAKIAVLDPMVEWVSLSITKPNPPLAYMKQSNTAACHAMHKPDTRGDYAKEHTNLTGLQ HHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCEE LSCTVRKVRSESVTRVYIGIGANVGNCLDNVQRAIKDIADHPMIELVSLGRLFRTTAVVG EEHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ESLDESLPVFLNTAIAIDTALSMQDLLALMLCIEKKLGRTRHSRTRHSLSSAQDAHQADS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TSDNPNQLHYPCAGRQGIQQPLHSSTLAHTQDGFVNRHIDLDILLAEGVQITEHGLCIPH CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEECCCCCCCC PRLSKRAFALLPLESIDPDLHIPGHGPITDLIHGLPEDQISSVATLRDSGYELFRHSITR CCCCCCEEEEEEHHHCCCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LNNCSAHNKAYVTPSAGQNYDSEQDFDAGLSHTESRGKTEPHGKI HCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10474189; 10542185; 11234002 [H]